Gene Saro_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0003 
Symbol 
ID3916045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2412 
End bp3131 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID640442728 
ProductNAD-dependent deacetylase 
Protein accessionYP_495286 
Protein GI87198029 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCGA TGAAACGCCC GCGCAATATC GTCGTTCTCA CCGGCGCCGG AATTTCCGCC 
GAATCCGGCA TCGACACCTT CCGTGGAGCC GGCGGCCTTT GGGAAAACCA CCGGGTCGAG
GACGTCGCGA CGCCCGAAGC CTTCGCGCGC GACCCCGAGC TTGTCCTGCG CTTCTACGAC
ATGCGGCGCG AGGCGATCCA GACGAAGGAA CCGAACGTCG CGCATCATGC GCTTGCCCGG
CTCGACCGGG AATGGCCGAG GAAGACGGCC GGAGAGGTCC TGATCGTCAC CCAGAACGTC
GACGACCTCC ACGAGCGGGG CGGTGCCATC AACGTGCTGC ACATGCATGG CGAACACCTC
AGTGCCTGGT GCACCGCCTG CGACGCGCGC CACCGCTGGA CCGGGCCGTT GCTCCACCGC
CCACCATGCC CGGCCTGCGC CATGCCGGCG CTGCGGCCCG ATATCGTCTG GTTCGGCGAG
ATTCCCTATC GCATGGACGA GATCCACGAC GCGCTGGCGG AGGCAGACCT GTTCGTTTCG
ATCGGCACTT CGGGCGCAGT CTATCCGGCG GCCGGTTTCG TGCGCACCGC ACGCGAACTG
GGCCTTCAGA CACTCGAACT CAATCTGGAA CGCTCTCAGG GGTCGGCCTG GTTCCACGAG
ACGCGGCTTG GTCCGGCGAC CGAGACGGTG ACCGCCTGGG TCGACGAGCT ACTGGCCTGA
 
Protein sequence
MVAMKRPRNI VVLTGAGISA ESGIDTFRGA GGLWENHRVE DVATPEAFAR DPELVLRFYD 
MRREAIQTKE PNVAHHALAR LDREWPRKTA GEVLIVTQNV DDLHERGGAI NVLHMHGEHL
SAWCTACDAR HRWTGPLLHR PPCPACAMPA LRPDIVWFGE IPYRMDEIHD ALAEADLFVS
IGTSGAVYPA AGFVRTAREL GLQTLELNLE RSQGSAWFHE TRLGPATETV TAWVDELLA