Gene Saro_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0002 
Symbol 
ID3917660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1629 
End bp2423 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID640442727 
ProductUBA/THIF-type NAD/FAD binding fold protein 
Protein accessionYP_495285 
Protein GI87198028 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGC CTGCCCTCTC CCCGGCTCTC ACGCCGGACC GTCTTGACCG CTTCGCCCGC 
CATATCGTCC TGCCCGAAGT GGGCGCGATC GGGCAGGCTC GGCTGGCCGC GAGCCATGTC
GTGCTGGTCG GCATGGGCGG CATCGGATCG CCGGCGCTCC AGTATCTTGC GGGCGCGGGC
GTCGGCAGGC TCACGCTGAT CGACGACGAC GTGGTCGAAG CATCGAACCT CCAGCGCCAG
ACGATCTATA CCGAAGAAGA CCTCGGCAAG CCCAAAGCGC AAGCGGCGGC AGCATGGGTC
GCGCGGTTCG ATCCGGCGCT CGAGGTCGTA CATCACGTCA CCCGCATCGG GCGGGAGAAT
GCCGCGGACC TAATCGCCGG AGCCGACGTC GTGCTCGACG GTTCGGACAA CTTCGCCACG
CGCCTGTCGG TTTCGGACGC CTGCGTTTCG GTAGGGGTAG CGCTCTCCAG TGTCGCTTTA
GGTCGCTTTC AGGGACAGGT GGCGAATTTC GCCGGGCACC GTCCGGGTGA GGCCTGCTAC
CGCTGTTTCG TGGGCGATGC CTTCGATGCC GAGGACTGCG ACACATGCGC CGACCTTGGG
GTGCTGGGCG CGATGGTCGG CATGATCGGC GCATTCGGAG CGATGGCGGC GATGCGGGTA
CTGCTGGAAG GCGTCAGCAC GCTGGGCGAC CCGCAATGGG GCCAACTCCA CGTATTCGAC
GGCCTCAAAC CCAGCCTGAG AACCATGCGC ATCGCCCGCG ATCCCGAATG TCGGGGCTGC
ACTTCAGGCC AGTAG
 
Protein sequence
MTTPALSPAL TPDRLDRFAR HIVLPEVGAI GQARLAASHV VLVGMGGIGS PALQYLAGAG 
VGRLTLIDDD VVEASNLQRQ TIYTEEDLGK PKAQAAAAWV ARFDPALEVV HHVTRIGREN
AADLIAGADV VLDGSDNFAT RLSVSDACVS VGVALSSVAL GRFQGQVANF AGHRPGEACY
RCFVGDAFDA EDCDTCADLG VLGAMVGMIG AFGAMAAMRV LLEGVSTLGD PQWGQLHVFD
GLKPSLRTMR IARDPECRGC TSGQ