| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_R0052 |
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| Symbol | |
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| ID | 3912052 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4820799 |
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| End bp | 4823628 |
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| Gene Length | 2830 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640712570 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.121613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTAAG GGTGTTCGGT GGATGCCTTG GCGCTGAGAG GCGATGAAGG ACGTGCTACG
CTGCGATAAG CCATGGGGAG CTGCGAAGAA GCTTTGATCC GTGGATTTCC GAATGGGGAA
ACCCACCTTC GATAGCCGGA ACTCCAAGAC CTTGTGTCTT GGTGAAAACC AAACCGCGAG
GTTTTGGATT TCCGGTTATC AAGAGAAGGT ATGAGACTCC TGAATACATA GGGGGTTTCA
AGCAAACCCA GGGAACTGAA ACATCTAAGT ACCTGGAGGA AAGGACATCA ACAGAGACTC
CGTTAGTAGT GGCGAGCGAA CGCGGACCAG GCCAGTCATC ATTGGAAGAC AATTGGAATC
TGTCAGGAAA GCAGAGCCTT AGAGGGTGAT AGCCCCGTAC AAGTAATGCG ACCAATGATG
CTCGAGTAAG GCGGGACACG TGAAATCCTG TCTGAACATG GGGGGACCAC CCTCCAAGCC
TAAGTACTCC TCAGCGACCG ATAGTGAACC AGTACCGTGA GGGAAAGGTG AAAAGCACCC
CGACGAGGGG AGTGAAATAG TTCCTGAAAC CGGACACTTA CAAACAGACG GAGCCCAAGA
TACGTTCTGG GTGACGTCGT ACCTTTTGTA TTATGGGCCA GCGACTTAAT TTAACGAGCA
AGCTTAAGCC GATAGGTGAA GGCGCAGCGA AAGCGAGTCT GAATAGGGCG TCAAGTTCGT
TGGATTAGAC CCGAAACCTA GTGATCTAGC CATGAGCAGG TTGAAGGTGA GGTAACACTC
ACTGGAGGAC CGAACGGGTG TCTGTTGAAA AAGACTCCGA TGACTTGTGG TTAGGGGTGA
AAGGCCAATC AAACTGGGAA ATAGCTGGTT CTCCGCGAAA GATATTTAGG TATCGCCTCG
GATGAATACC TCAGGGGGTA GAGCACTGGA TGGGCTAGGG GGACTTACCG TCTTACCAAA
CCCAACCAAA CTCCGAATAC CTGAGAGTAA TATCCGGGAG TCACACGGCG GGTGCTAACG
TCCGTCGTGG AGAGGGAAAC AACCCGGACC TACAGCTAAG GCCCCTAATT CGTGGCTAAG
TGGGAAAGGA TGTGGGAATC CCAAAACAAC CAGGAGGTTG GCTTAGAAGC AGCCATCCTT
TAAAGAAAGC GTAACAGCTC ACTGGTCTAA ATAAGGGTTC CTGCGCCGAA GATGTAACGG
GGCTCAAGCC ACGAGCCGAA GCTTAGGGTG TGATCCGCAA GGGTCACGCG GTAGCGGAGC
GTTCTGTAAG CCTGCGAAGG GCGACCCGTG AGGGCGCCTG GAGGTATCAG AAGTGCGAAT
GCTGGCATGA GTAACGACAA ACACTGTGAA AGACAGTGTC GCCGAAAGTC CAAGGGTTCC
TGCGTAAAGT TAATCTTCGC AGGGTTAGCC GGTCCCTAAG GCGAGGCAGA AATGCGTAGT
CGATGGGAAT CACGTGAATA TTCGTGAGCC AGTGGATGGT GACGAATCCC TTATGTTGTT
CGACCTTACT GGATTGGTCG GGCCTCGACG GGGTTCCAGG AAATAGCCTC CACATCAGAC
CGTACCCGAA ACCGACACAG GTGGACTGGT AGAGTATACC AAGGCGCTTG AGAGAACTAT
GTTGAAGGAA CTCGGCAATT TACCTCCGTA ACTTCGGGAT AAGGGGGCCC ATTGCGTGCG
CAAGCACGTC GTGGGGGCAC AGACCAGGGG GTGGCAACTG TTTAACAAAA ACACAGGGCT
CTGCGAAATC GCAAGATGAC GTATAGGGTC TGACGCCTGC CCGGTGCCGG AAGGTTAAGA
GGAGGTGTGC AAGCACTGAA TTGAAGCCCC GGTAAACGGC GGCCGTAACT ATAACGGTCC
TAAGGTAGCG AAATTCCTTG TCGGGTAAGT TCCGACCTGC ACGAATGGCG TAATGACTTC
CCCGCTGTCT CCAACATAGA CTCAGTGAAA TTGAATTCCC CGTGAAGATG CGGGGTTCCT
GCGGTCAGAC GGAAAGACCC CGTGCACCTT TACTGTAGCT TTGCGCTGGT ATTCGTGACT
GTTTGTGTAG AATAGGTGGT AGGCTTTGAA GCTCGGGCGC CAGCTCGGGT GGAGTCGAAA
TGTGAAATAC CACCCTAATG GTTATGGATA TCTAACCGCG ACCCCTGATC GGGGTCCGGG
ACAGCGCATG GTGGGCAGTT TGACTGGGGC GGTCGCCTCC CAAAGAGTAA CGGAGGCGTG
CGACGGTAGG CTCAGAACGG TCGGAAATCG TTCGTCGAGT ACAATGGCAT AAGCCTGCCT
GACTGCGAGA CCAACAAGTC GAGCAGAGAC GAAAGTCGGT CATAGTGATC CGGTGGTCCC
GCGTGGATGG GCCATCGCTC AACGGATAAA AGGTACGCCG GGGATAACAG GCTGATGACG
CCCAAGAGTC CATATCGACG GCGTCGTTTG GCACCTCGAT GTCGGCTCAT CACATCCTGG
GGCTGGAGAA GGTCCCAAGG GTTCGGCTGT TCGCCGATTA AAGTGGTACG TGAGCTGGGT
TCAGAACGTC GTGAGACAGT TCGGTCCCTA TCTGCCGTGG GTGTTGGAAT GTTGAGAGGA
TTTGTCCCTA GTACGAGAGG ACCGGGATGA ACGTACCTCT GGTGGAGCTG TTGTCGCGCC
AGCGGCAGTG CAGCATAGCT ATGTACGGAC GGGATAACCG CTGAAAGCAT CTAAGCGGGA
AACCCACCTC AAAACGAGCA TTCCCTTGAG AACCGTGGTA GACCACCACG TTGATAGGCC
GGGTGTGGAA GTGCGGCAAC GCATGTAGCT TACCGGTACT AATCGTTCGA TTGGCTTGAT
TGCTCTCATT
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| Protein sequence | |
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