| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4708 |
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| Symbol | |
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| ID | 3912526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5328176 |
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| End bp | 5328835 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637886613 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_488302 |
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| Protein GI | 86751806 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.655126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCAG TGCGTTTGGA CCACGCGTTT CGATTGTCGA TGATTGCCGT AACGGCAGCG
CTCGCGCTCG GCGGCTGCAT GCGGCGGTCG GGGCCGGTCG CGATCCAGCC GTCCAACACC
CTCGACAGCA TGGCCTATGG TGGCGGCCCT GCCGGACCGG GTCCGGCTGC CTATGCGTCC
GCGCCGATGC CCGGCCCCCG AACGGAATAT CGTCTCGATG CCGGCGACCG GCTGCGGATC
GTGGTCTACG GCCAGGAAGG TCTCACCAAC AGCTACGCGA TCGATGCCTC CGGCGCGATC
ACCATGCCGC TGATCGGCAG CGTGCCGGCG CGCGGCCGCA CGCCGGCCGA ACTCGCCGCC
GCGATCTCCG CGCGGCTGCG CAACGGCTTC ATTCGTGAGC CGTCGGTGGC GGTCGAAGTC
GAATCCTATC GGCCGTTCTA TATTCTCGGC GAAGTGCTGG CGCCCGGCCA ATATCCCTAT
GTGCCGAACA TGACGGTCGA AAGCGCGATC GCGATCGCCG GCGGTTTCTC GCCGCGCGCC
CGCCGCGACA GCGCGACGCT GACGCATCCC GAGGGCGGCG CGATGGTGCG TGCCGTCGTC
CCGCTCGGCA CGCCGCTCAG CCCCGGCGAC ACCGTGATGG TCAGCGAACG CTGGTTCTGA
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| Protein sequence | MAPVRLDHAF RLSMIAVTAA LALGGCMRRS GPVAIQPSNT LDSMAYGGGP AGPGPAAYAS
APMPGPRTEY RLDAGDRLRI VVYGQEGLTN SYAIDASGAI TMPLIGSVPA RGRTPAELAA
AISARLRNGF IREPSVAVEV ESYRPFYILG EVLAPGQYPY VPNMTVESAI AIAGGFSPRA
RRDSATLTHP EGGAMVRAVV PLGTPLSPGD TVMVSERWF
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