Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4706 |
Symbol | |
ID | 3912524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5326426 |
End bp | 5327532 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886611 |
Product | response regulator receiver modulated metal dependent phosphohydrolase |
Protein accession | YP_488300 |
Protein GI | 86751804 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.116459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAT TAGCCCGACA ATCGGCGCCC CAGACCGAAC CGCGGCGACG GCTGATCCTG GCGTCCGACC GCCGCGATCA GAGCGCGGAT CTCGCGCGCA TCCTCGCCGG CGTCGCCGAG GTCCAGATCG TCTCGACCGC GGAATTGCCG GAAGCCCCGT CGCGTGACCT GTCCGGGATC GTCGTCGATA TCAATTTGCG CTCCGCCGAC AGCGTGCAGC GCGTCAAACA ACGGTTGCTC GGCGGCGGTT ACCAGCCCTT CCCCCGGCTG TTCGTGCTGG CCGACGAACT GCATCACGGC TCGATGCAGG CCTGGGCGCT CGGCGCCACC GACACCATCG CCCGCCCGTT CGATTCGCGT GATCTGCTGG CGCGCATCCG CGCCGCGTTT CCGGATGCGT CGGAGATCAC CGCCGACGCC CGCGCCGAGG CGATGAGCCA GGGCATCGCG GCCGCGCACG GCGTGCTGGT CAAGATGTTC GATCGGCTGC CGGCCGGCAA GCCGCTGACC TATCAGGACG TGCTCCGGGC CGAAGGACCG ATCCTCAAGG CGATCCGGCG CAGCTCGCTG CGCGAATGGC TCGCCGCGGT CGGCCGCCAC CACAACGAGA GCTATCGGCT CGCGCTGTTC GCGACCGGCT ATGCGGTCGC CTTCGCCCAG CATCTCGGGA TGCGCGAGGA AGACCAGCGC CGCCTGACCC GCGCCGCGCT GCTGTTCGAC GTCGGCAAGG CGTTCGTCGA CGTCGCCCTG CTCGACAATG TCGACGCCCT GCAGGGCGAA CGGCTGCGCA AATTCCGCGA GCATCCGCGG CTCGGCTACG ATGCGCTGGC CTCCGAGGGC AGCTTCCCGC GCGAGACCCT CGACGTCGTG CTGCATCACC ACGAACTGCT CGACGGCTCG GGCTATCCCG ACGCGCTGCA CGGCGACCAG ATCAGCGACA TCGTCCGCAT CACCACCATC GTCGACATCT TCACGTCGCA GGTGGCGCAG CGCAAGAACC ACATCCCGTT GATGCCGCTG CGGGCGTTCT GCCAGATGGA GGAGATGGGC GACAAGATCG ACCAGCGCCT GCTGCAGGCG TTCCGCCCGG TGGCGATGGG CGGTTAG
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Protein sequence | MNSLARQSAP QTEPRRRLIL ASDRRDQSAD LARILAGVAE VQIVSTAELP EAPSRDLSGI VVDINLRSAD SVQRVKQRLL GGGYQPFPRL FVLADELHHG SMQAWALGAT DTIARPFDSR DLLARIRAAF PDASEITADA RAEAMSQGIA AAHGVLVKMF DRLPAGKPLT YQDVLRAEGP ILKAIRRSSL REWLAAVGRH HNESYRLALF ATGYAVAFAQ HLGMREEDQR RLTRAALLFD VGKAFVDVAL LDNVDALQGE RLRKFREHPR LGYDALASEG SFPRETLDVV LHHHELLDGS GYPDALHGDQ ISDIVRITTI VDIFTSQVAQ RKNHIPLMPL RAFCQMEEMG DKIDQRLLQA FRPVAMGG
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