Gene RPB_4706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4706 
Symbol 
ID3912524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5326426 
End bp5327532 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content68% 
IMG OID637886611 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_488300 
Protein GI86751804 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.116459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAT TAGCCCGACA ATCGGCGCCC CAGACCGAAC CGCGGCGACG GCTGATCCTG 
GCGTCCGACC GCCGCGATCA GAGCGCGGAT CTCGCGCGCA TCCTCGCCGG CGTCGCCGAG
GTCCAGATCG TCTCGACCGC GGAATTGCCG GAAGCCCCGT CGCGTGACCT GTCCGGGATC
GTCGTCGATA TCAATTTGCG CTCCGCCGAC AGCGTGCAGC GCGTCAAACA ACGGTTGCTC
GGCGGCGGTT ACCAGCCCTT CCCCCGGCTG TTCGTGCTGG CCGACGAACT GCATCACGGC
TCGATGCAGG CCTGGGCGCT CGGCGCCACC GACACCATCG CCCGCCCGTT CGATTCGCGT
GATCTGCTGG CGCGCATCCG CGCCGCGTTT CCGGATGCGT CGGAGATCAC CGCCGACGCC
CGCGCCGAGG CGATGAGCCA GGGCATCGCG GCCGCGCACG GCGTGCTGGT CAAGATGTTC
GATCGGCTGC CGGCCGGCAA GCCGCTGACC TATCAGGACG TGCTCCGGGC CGAAGGACCG
ATCCTCAAGG CGATCCGGCG CAGCTCGCTG CGCGAATGGC TCGCCGCGGT CGGCCGCCAC
CACAACGAGA GCTATCGGCT CGCGCTGTTC GCGACCGGCT ATGCGGTCGC CTTCGCCCAG
CATCTCGGGA TGCGCGAGGA AGACCAGCGC CGCCTGACCC GCGCCGCGCT GCTGTTCGAC
GTCGGCAAGG CGTTCGTCGA CGTCGCCCTG CTCGACAATG TCGACGCCCT GCAGGGCGAA
CGGCTGCGCA AATTCCGCGA GCATCCGCGG CTCGGCTACG ATGCGCTGGC CTCCGAGGGC
AGCTTCCCGC GCGAGACCCT CGACGTCGTG CTGCATCACC ACGAACTGCT CGACGGCTCG
GGCTATCCCG ACGCGCTGCA CGGCGACCAG ATCAGCGACA TCGTCCGCAT CACCACCATC
GTCGACATCT TCACGTCGCA GGTGGCGCAG CGCAAGAACC ACATCCCGTT GATGCCGCTG
CGGGCGTTCT GCCAGATGGA GGAGATGGGC GACAAGATCG ACCAGCGCCT GCTGCAGGCG
TTCCGCCCGG TGGCGATGGG CGGTTAG
 
Protein sequence
MNSLARQSAP QTEPRRRLIL ASDRRDQSAD LARILAGVAE VQIVSTAELP EAPSRDLSGI 
VVDINLRSAD SVQRVKQRLL GGGYQPFPRL FVLADELHHG SMQAWALGAT DTIARPFDSR
DLLARIRAAF PDASEITADA RAEAMSQGIA AAHGVLVKMF DRLPAGKPLT YQDVLRAEGP
ILKAIRRSSL REWLAAVGRH HNESYRLALF ATGYAVAFAQ HLGMREEDQR RLTRAALLFD
VGKAFVDVAL LDNVDALQGE RLRKFREHPR LGYDALASEG SFPRETLDVV LHHHELLDGS
GYPDALHGDQ ISDIVRITTI VDIFTSQVAQ RKNHIPLMPL RAFCQMEEMG DKIDQRLLQA
FRPVAMGG