Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4701 |
Symbol | |
ID | 3912519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5321057 |
End bp | 5322913 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886606 |
Product | ATP-dependent DNA helicase, RecQ |
Protein accession | YP_488295 |
Protein GI | 86751799 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCT CCGCCTCGCG CCACGCCTCC GACGACCTCG ATGCCCGCGC GCTGTCGACG CTGAATCACG TGTTCGGCCT GCCCGGCTTT CGCGGCCATC AGGAAGCGAT CATCCGCCAT GTCGCGCATG GCGGCGATTG TCTGGTGCTG ATGCCGACCG GGGGCGGCAA GTCGCTGTGC TACCAGTTGC CCGCCCTGTT GAGAGACGGC TGCGGCATCG TGGTGTCGCC GCTGATCGCG CTGATGCGCG ACCAGGTGGC GGGGCTGCTG GAGGCCGGCG TGCGCGCCGC GGCGCTGAAT TCCAGCCTAA GCTACGCCGA GGCCGACGCG ATCGAGCGGC AGCTGCTCGC CGGCGAACTC GACCTTTTAT ACGTCGCCCC CGAACGCCTG CTGACACCGC GTTGCCTGGC GATGCTGGCG CGGGCGAAAA TCGCGCTGTT CGCGATCGAC GAGGCGCATT GCGTGTCGCA ATGGGGCCAC GACTTCCGGC CGGAATATGT CGGCCTCTCC GCCATCGCCG AGAAATTCCC CAACGTGCCG CGGATCGCCC TGACCGCGAC CGCCGACGCA CTGACGCGGC GCGAGATCAG CGAGCGGCTC GGCCTCACCG ACGCGCCCTG CTTCGTGTCG AGCTTCGACC GGCCGAACAT CCGCTACGCC ATCGTCGACA AGCAGAATGC GCCGGCGCAG CTCAAGGCGT TCATCGCCGA CAAGCATATG GGCCATTCCG GCGTGGTGTA TTGCCTGTCG CGCGCCAAGG TCGAGGACAT CGCCGACACG CTGTGCAAGG CCGGCATCGA CGCGCTGCCC TATCACGCCG GTCTGCCGGC GGAGATCCGC GCGCGCAATC AGGACCGCTT CATCAACGAG GACGGCGTGG TGATCGTCGC CACCATCGCG TTCGGCATGG GCATCGACAA GCCCGACGTG CGCTTCGTCG CGCATCTCGA CCTGCCCAAG AGCATCGAGG CCTATTATCA GGAGACCGGC CGCGCCGGCC GCGACGGCAA GCCGTCGGAT GCCTGGATGG CCTACGGCCT TTCCGACATC GTGCAGCAGC GGCGGATGAT CGACGAATCC TCCGGCTCCG ACGCCTTCAA GCGGGTGTCG ATGGGCAAGC TCGATGCGCT GGTCGGCCTG TGTGAATCCA CCGCCTGCCG CCGCACCCGG CTGCTCGGCT ATTTCGGCGA GACGGCGCTC GAGCCGCAGT GCGGCAATTG CGATAATTGT CTGTCGCCGC CCAAGGTGAT CGACGGCACC GTGGCGGCGC AGAAGCTGCT GTCCTGCGCC TATCGCACCG GGCAGCGGTT CGGCGCCCAG CATCTGATCG ACGTGCTGCT CGGCCGCCTG ACCGAGCGCG TCGGCCAGTT CGGCCACGAC AAGCTCTCGG TGTTCGGCAT CGGCGGCGAA TTCAACGAGA AGCAATGGCG GGCGGTGATC CGGCAATTGG TGTCGCTCGG GCACCTCGCG CCGGACAGCG AGGCGTTCGG CGCGCTGAAA CTCACCGAGA GTTCGCGCGC GGTGCTGAAG GGCGACGCGC AGGTGATGCT GCGCGAGCAG ACCGGCGGCC GGCCGCCGCG GGCGAAATCC CGCCGCGGCG ATCTGGTCGG CGGCGCGCCG CGCGAATCGA CCGGCGATCC GGATCTGTTC GCGGCGCTGA AGGCGTGGCG CTCCGAGGTG GCGAAGAGCC GCGGCGTGCC GGCCTATGTG GTGCTGCACG ACGCCACCAT GGACGGTATC GCCGCAGTGC GCCCACGCTC GCTCGACGAA CTGCGCGGCA TTCCCGGGAT CGGCGACAAG AAGCTGGAGC ATTATGGCCA GGAATTGCTG GCCCTGGTAA ATGCCTCAGG CAGCTGA
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Protein sequence | MTLSASRHAS DDLDARALST LNHVFGLPGF RGHQEAIIRH VAHGGDCLVL MPTGGGKSLC YQLPALLRDG CGIVVSPLIA LMRDQVAGLL EAGVRAAALN SSLSYAEADA IERQLLAGEL DLLYVAPERL LTPRCLAMLA RAKIALFAID EAHCVSQWGH DFRPEYVGLS AIAEKFPNVP RIALTATADA LTRREISERL GLTDAPCFVS SFDRPNIRYA IVDKQNAPAQ LKAFIADKHM GHSGVVYCLS RAKVEDIADT LCKAGIDALP YHAGLPAEIR ARNQDRFINE DGVVIVATIA FGMGIDKPDV RFVAHLDLPK SIEAYYQETG RAGRDGKPSD AWMAYGLSDI VQQRRMIDES SGSDAFKRVS MGKLDALVGL CESTACRRTR LLGYFGETAL EPQCGNCDNC LSPPKVIDGT VAAQKLLSCA YRTGQRFGAQ HLIDVLLGRL TERVGQFGHD KLSVFGIGGE FNEKQWRAVI RQLVSLGHLA PDSEAFGALK LTESSRAVLK GDAQVMLREQ TGGRPPRAKS RRGDLVGGAP RESTGDPDLF AALKAWRSEV AKSRGVPAYV VLHDATMDGI AAVRPRSLDE LRGIPGIGDK KLEHYGQELL ALVNASGS
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