| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4693 |
|---|
| Symbol | |
|---|
| ID | 3912511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 5312621 |
|---|
| End bp | 5313979 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637886598 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_488287 |
|---|
| Protein GI | 86751791 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGAC ATTCGCTGCG GCTGCGGCTG ATCGCCGGCG GCGCCGCGGC GATCCTGGTC
GCGCTCAGCA TCGCCGGCAT CGCGCTCATC ATCCTGTTCG AGCGTCACGT CACCCGCACC
ATCGCCGACG ACCTCGACGT CTCGCTGAAG CAGTTGATCG CCGGCGTCGA GGCCGGGCCG
GACGGCCGCC TGGTGCTGGC GCGGTCGCCG ACCGATCCGC GCTTCTCCGA GCCGCTGTCC
GGTCTGTACT GGCAGGTCGG CGACGACCAC GACCGGCTGC TGCGGTCGCG CTCGCTGTGG
GACGACCGGC TGAGCGTGCC GATCGACCAG CCCGGCCCGG GCGAGATGCA TCATCACGAC
ATCGCCGGCC CCGCCGGCGC GCGGCTGTCG ATCGTCGAGC GCCAGGTGCT TCTCACCATC
GCCGGCAAGC CGGTGCCGAT CCGCGCCGCG GTCGCGGTCG ATCTGGCCCG GGTCAGCGCC
GCCGGCCGGG CCTTCGCGCG CGATCTGATG ATCGCGCTCG GTCTTCTCGG CGCGGTGCTG
GCGCTCGCCA CGTCGGTGCA GGTGATGCTC GGGCTGCGAC CGCTCGGTGC GTTGCGCGAC
GGCGTCGCCG AGATCCGCTC CGGCCGGCGG CATCGCCTGC CCGACGCGGT GCCGGACGAG
GTGCAGCCGC TGGTCGAGGA GGTCAACGCG CTGCTCGACG CCCAGGCGCG CGAGATCGCC
CGCTCGCGCG ACCGCGCCGC CGATCTTGCC CATGGCCTGA AGACGCCACT CGCAGCTTTG
GCCGCCGACG CCGCGCGGCT GCGCGAGCGC GGCGAGGACA AGCTCGCCCG CGACATCGAG
GCGGTCGGCA GCGCGATGAG CCGCCATGTC GATCGCGAGC TGGCGCGCGC CCGGCTGCGC
GGCGACGCCC GCCGCGGCGA AAGCGTCACC GTCGATCTGG CGCCGCTGGT GCGCTCGCTG
GTGACGATCC AGTCGCGCAC CCCGGCCGGC CGGCGCATCG CGTTCGACGC GCAGATCGCC
GACTACGTCT CGGTGCCGCT CGACCGCGCC GATCTGGCCG AGGTGCTCGG CAATCTGCTC
GACAACGCGG TGCGCCACGC CCGCAGTCGC GTCCGCATCG GCACCGCCTG CGATTCGGAC
GGCTTCCGCA TCGCGATCGA GGACGACGGC GACGGCCTCG ACGAGGCCGC TTGCGCCACG
GTGCTCGGAC GCGGCATCCG CCTCGACCAG CGCGGCGAAG GCGCCGGCCT CGGCCTCGCC
ATCGTGCAGG ACGTGCTCGA GGCCTATGGC TGGACGCTGC ATCTGTCCCG CTCCGACCTC
GGCGGCCTGA AAGCGAGCTG CTGCACGGCG GTGGCGTAG
|
|---|
| Protein sequence | MTRHSLRLRL IAGGAAAILV ALSIAGIALI ILFERHVTRT IADDLDVSLK QLIAGVEAGP
DGRLVLARSP TDPRFSEPLS GLYWQVGDDH DRLLRSRSLW DDRLSVPIDQ PGPGEMHHHD
IAGPAGARLS IVERQVLLTI AGKPVPIRAA VAVDLARVSA AGRAFARDLM IALGLLGAVL
ALATSVQVML GLRPLGALRD GVAEIRSGRR HRLPDAVPDE VQPLVEEVNA LLDAQAREIA
RSRDRAADLA HGLKTPLAAL AADAARLRER GEDKLARDIE AVGSAMSRHV DRELARARLR
GDARRGESVT VDLAPLVRSL VTIQSRTPAG RRIAFDAQIA DYVSVPLDRA DLAEVLGNLL
DNAVRHARSR VRIGTACDSD GFRIAIEDDG DGLDEAACAT VLGRGIRLDQ RGEGAGLGLA
IVQDVLEAYG WTLHLSRSDL GGLKASCCTA VA
|
|---|
| |