Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4690 |
Symbol | |
ID | 3912508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5306357 |
End bp | 5307550 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637886595 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_488284 |
Protein GI | 86751788 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCA AGCTGTTGTC CGCCGCGCTG GCGACCAGCG CCCTGTTCGC CATTGCTCCG GCGTCGGCGC AGGGCGTCAA GATCGGCATC CTCAACGATC AGTCCGGCGT CTATGCCGAT TACGGCGGCA AGTGGTCGCT CGAAGCCGCC AAGATGGCGG TGGAGGATTT CGGCGGCGAG GTGCTCGGCC AGAAGATCGA GATCGTTTCG GCCGACCATC AGAACAAGCC CGACACGGCG GTTGCGATCG CGCGGAAGTG GTACGACGTC GACGGCGTCG ACATGATCAC CGAGCTGACC ACCTCGTCGG TGGCGCTGGC GATCCAGGAC CTGTCGAGGG AAAAGAAGAA GATCGACATT GTGGTCGGCG CCGCGACCTC GCGCATCACC GGCGACGCCT GCCAGCCTTA CGGCTTCCAT TGGGCCTATG ATACGCACGC GCTCGCGGTC GGCACCGGCG GCGCGCTGGT GAAGGCGGGC GGTGATTCCT GGTTCTTCCT CACCGCGGAC TACGCCTTTG GATATGCGTT GGAAAAGGAC ACCAGCGAAG TCGTCAAGGC GAACGGCGGC AAGGTGCTCG GCTCGGTCCG GCATCCGCTG AATTCGTCGG ACTTCTCCTC GTTCCTGCTG CAGGCGCAGA GCTCGAAGGC GAAGATCATC GGCCTTGCCA ATGCCGGCCT CGACACCGCC AATTCGATCA AGCAGGCCTC CGAATTCGGC ATCGTCGCCG GCGGCCAGAA ACTCGCCGGG CTGCTGCTCA CGCTCGCCGA GGTGCACGGC CTCGGTCTCA AGGCGGCGCA GGGGCTGGTG CTGACCGAGG CGTATTACTG GGACCGCGAC GACAAGTCCC GCGAGTTCGC CGAGCGCTTC TTCAAGCGGA CCAGCCGGAT GCCGAACATG ATCCAGGCCG GCACCTATTC GGCGACGCTG TCCTATCTCA AGGCGGTGAA GGCCGCCGGC ACCAAGGACA CCGAAGCGGT GGCGGCGAAG CTCAAGAAGC TCCCGGTCGA CGACGCCTTC GCCAAGGGCA AGGTGCTGGC CAACGGCCGC TTCGTCCACG ATCTGTATCT GTTCGAGGTG AAGAAGCCGG AAGAGTCCAA GAAGCCGTGG GACTATTACA AGCTGATCTC GACGGTCGAG GGCTACATGG CGTTTCCGAG TGCCGCCGAG AGCGGCTGCC CGTTGACCAG GTAA
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Protein sequence | MNVKLLSAAL ATSALFAIAP ASAQGVKIGI LNDQSGVYAD YGGKWSLEAA KMAVEDFGGE VLGQKIEIVS ADHQNKPDTA VAIARKWYDV DGVDMITELT TSSVALAIQD LSREKKKIDI VVGAATSRIT GDACQPYGFH WAYDTHALAV GTGGALVKAG GDSWFFLTAD YAFGYALEKD TSEVVKANGG KVLGSVRHPL NSSDFSSFLL QAQSSKAKII GLANAGLDTA NSIKQASEFG IVAGGQKLAG LLLTLAEVHG LGLKAAQGLV LTEAYYWDRD DKSREFAERF FKRTSRMPNM IQAGTYSATL SYLKAVKAAG TKDTEAVAAK LKKLPVDDAF AKGKVLANGR FVHDLYLFEV KKPEESKKPW DYYKLISTVE GYMAFPSAAE SGCPLTR
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