| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4684 |
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| Symbol | |
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| ID | 3912502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5298431 |
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| End bp | 5299651 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637886589 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_488278 |
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| Protein GI | 86751782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC GCAACGCGCT GCTTGCAGCC GGACTATTTG CGCTCGCCGC AACCCAGCCT
GCCTTCGCCC AGAAGCAATA CGGCCCCGGC GTCACCGACA CCGAAATCAA GATCGGGCAG
ACCATGCCCT ACAGCGGCCC GGCTTCGGCA TATGGCGTGC AGGGCCATGT CCAGAACGCC
TACTACGCGA TGATCAACGC GAAGGGCGGC GTCAACGGCC GCAAGATCAA CCTGATCAGC
CTCGACGACG CCTATTCGCC GCCGAAGACG GTGGAGCAGA CCCGCAAGCT GGTCGAGCAG
GACGAGGTGC TGGCGATCGT CGGCACCGTC GGCACGCCGA CCAATTCCGC GACTCAGAAA
TATCTCAACG GCAAAAAGGT GCCGCAGATC TTCATCTCCA CGGGGGCGGC AAAATGGGAT
GATCCGAAGA CCTTCCCGTG GACCACGCAG CTCTATCCTC CCTATCAGAT GGAAGGCATG
ATTTTCGCGA AGTACCTGCT CAAGAACAAG CCCGACGCCA AGCTCGGCGT GTTCTCGCAG
AACGACGACG CCGGCAAGGA CTACGTCAAG GGCCTGAAGG AAGGGCTCGG CGACAAGGCC
AAGACGATGA TCGTCAAGGA GGTCACCTAC GAGGTCACCG ATCCGACCGT CGACTCGCAG
ATCGTCGCGC TGAAGGCGTC GGGCGCCGAC ACGCTGTTCA CGATGGCGAC GCCGAAATTT
GGCGCCCAAG CGATCCGCAA GGTCCACGAA CTGAACTGGA AGCCGCTCAA CTTCGTCGTC
AGCGTCGCCA GCTCGATCAA GGGCGTGCTC GAACCCGCCG GCAGCGAAGC CTCGACCGGG
TTGCTCACCG CGCTCGCCAT GAAGACGCCG ACCGACCCGC GGTTCGAGAA CGATGCCGAC
GTCAAGGAAT TCAAGGAATT CCTGGCCAAG TGGTTTCCGA AAGGCGACAT CGCCGACGGC
AGCGTGGTGA TCGGCTACAT CTCGGCCTAT ATGACGGCGA AGACGCTCGA AGCCTGCGGC
GACAATCTCA CCCGCGACAA CCTGCTCAAG CAGGCGACCA ACATCAAGCC GACGGTTGCT
CCGCTGCTAC TGCCGGGCGT CAAGATCTCG ACGCGGCCGG ACCGCTACGC GCCCTACACC
CAGATGCAGA TCGCCCGTTT CGACGGCAAG AGCTGGGTGC CTGAAGGCGA AGTGTTCAAC
ACCGACGCGA CCAGCCAGTA A
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| Protein sequence | MSTRNALLAA GLFALAATQP AFAQKQYGPG VTDTEIKIGQ TMPYSGPASA YGVQGHVQNA
YYAMINAKGG VNGRKINLIS LDDAYSPPKT VEQTRKLVEQ DEVLAIVGTV GTPTNSATQK
YLNGKKVPQI FISTGAAKWD DPKTFPWTTQ LYPPYQMEGM IFAKYLLKNK PDAKLGVFSQ
NDDAGKDYVK GLKEGLGDKA KTMIVKEVTY EVTDPTVDSQ IVALKASGAD TLFTMATPKF
GAQAIRKVHE LNWKPLNFVV SVASSIKGVL EPAGSEASTG LLTALAMKTP TDPRFENDAD
VKEFKEFLAK WFPKGDIADG SVVIGYISAY MTAKTLEACG DNLTRDNLLK QATNIKPTVA
PLLLPGVKIS TRPDRYAPYT QMQIARFDGK SWVPEGEVFN TDATSQ
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