| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4679 |
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| Symbol | |
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| ID | 3912497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5292705 |
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| End bp | 5293946 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886584 |
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| Product | major facilitator transporter |
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| Protein accession | YP_488273 |
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| Protein GI | 86751777 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.206752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGACG CGACCGCGAT CGATGGATTC GCTGACGATG CGCGCGCACG CTCGAACGTG
ATGCGGCTGG CGGCGGCGCA GGCGCTGACC GGCGCCAATG CGGCGGTGAT CTTCGCCACC
GGCTCGATCA TCGGCGCGCA GCTCGCGCCC AGCGTGGCGC TCGCGACCGT GCCGATCTCG
ATGTATGTGG TCGGCCTCGC CGCCGGCACG CTGCCGACCG GCGCGATCGC GCGGCGCTAT
GGCCGCCGCG TCTCCTTCAT GATCGGCGCC GGCTGCGGCG CGTTCACCGG CCTGCTCGGC
GCGCTGGCGA TCCTGTACGG CTCGTTCGAG CTGTTCTGCG TGGCCACCTT TCTCGGCGGG
CTGTACGGCG CGGTGTCGCA ATCCTATCGC TTCGCCGCCG CCGACGGCGC CAGCGTCGCG
TATCGCCCCA AGGCGGTATC CTGGGTGATG GCCGGCGGCG TGTTCGCCGG CGTGCTCGGT
CCGCAGCTGG TGCAGTGGAC CATGGACATT TGGCAGCCTT ATCTGTTCGC CTTCAGCTAT
CTGGTGCAAG CCGCGGTCGC GCTGGTCGCG ATGGCGGTGC TGTGGAGCGT CGACGCGCCG
AAGCCGCAGC CCGCCGATTT CGCCGGCGGC CGGCCGCTGC TCGAAATCGT GCGGCAGCCG
CGCTTCATCG CCGCGGCGAT GTGCGGCGCG ATCGCCTATC CGATGATGAA TCTGGTGATG
ACGTCGGCGC CGCTCGCGAT GCAGATGTGC GGGCTGCCGA TCAGCGATTC CAATTTCGGC
CTGCAATGGC ACATCGTCGC GATGTATGCG CCGAGCTTCT TCACCGGCTC GCTGATCGCG
AAATTCGGCG CGCCGCGCGT GGTCGCGCTC GGGCTGGCGC TGGAAGCTGC AGGCGCGTCG
ATCGGCCTGA TGGGGATCAC CGCCCCGCAT TTCTGGGCGA CGCTGTTCGT GATCGGGGTA
GGCTGGAATT TCGCCTTCGT CGGCGCTTCG GCGCTGGTGC TGGAGACCCA CCAGCCGAGC
GAAAAGAACA AGGTGCAGGC GTTCAACGAT TTCGTGGTGT TCGGCATGAT GGCGCTGGGC
TCGTTCGGGT CCGGGCAATT GCTGGCGAAT TACGGCTGGG CGACCGTCAA CCTGACGGTG
TTTCCGCCGG TTCTGCTCGG CCTCGTCGTG CTCGCGATCA CCGGCTGGTC GCGAAAACGG
GTGGCGGCGG CCGCAGCCGC CGTGCCAGAA CGCGGCATCT GA
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| Protein sequence | MVDATAIDGF ADDARARSNV MRLAAAQALT GANAAVIFAT GSIIGAQLAP SVALATVPIS
MYVVGLAAGT LPTGAIARRY GRRVSFMIGA GCGAFTGLLG ALAILYGSFE LFCVATFLGG
LYGAVSQSYR FAAADGASVA YRPKAVSWVM AGGVFAGVLG PQLVQWTMDI WQPYLFAFSY
LVQAAVALVA MAVLWSVDAP KPQPADFAGG RPLLEIVRQP RFIAAAMCGA IAYPMMNLVM
TSAPLAMQMC GLPISDSNFG LQWHIVAMYA PSFFTGSLIA KFGAPRVVAL GLALEAAGAS
IGLMGITAPH FWATLFVIGV GWNFAFVGAS ALVLETHQPS EKNKVQAFND FVVFGMMALG
SFGSGQLLAN YGWATVNLTV FPPVLLGLVV LAITGWSRKR VAAAAAAVPE RGI
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