| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4677 |
|---|
| Symbol | |
|---|
| ID | 3912495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 5290718 |
|---|
| End bp | 5291221 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637886582 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_488271 |
|---|
| Protein GI | 86751775 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTG CTGAAGCAGC GACACCCATC CCGTCCGGCA CAAGGATCGG TCATGTCCAT
CTGAAAGTCG CCGACCTCGA GCGCGCGCTC GGCTTCTATT GCGGCGTGCT CGGCTTTCAG
CTGATGCAGC GGTTGGGCGA TCAGGCGGCC TTCATCTCCG CGGGCGGTTA TCACCACCAT
ATCGGGCTGA ACACCTGGGA GAGCAAAGGC GGCTCGCCGC CGCCGCCCGG ATCGACGGGG
CTGTATCACA CCGCGATCCT GTACCCGACC CGCGCAGCGC TGGCGGATGC GCTGCATCGC
GTGCTGCAAG CGGGCATCGC GCTCGACGGC GCCAGCGACC ACGGCGTCAG CGAGGCGCTG
TATCTGCGCG ATCCCGACGA CAACGGCGTC GAATTGTATC GCGACCGCCC TGAGGCGGAG
TGGCCGCGCA GCGCCGACGG CGCGCTGTCG ATGTTCACGC GGCGGCTCGA CCTCGACGAC
CTGCTGCGAA CGCGCGTGGC GTAG
|
|---|
| Protein sequence | MQAAEAATPI PSGTRIGHVH LKVADLERAL GFYCGVLGFQ LMQRLGDQAA FISAGGYHHH
IGLNTWESKG GSPPPPGSTG LYHTAILYPT RAALADALHR VLQAGIALDG ASDHGVSEAL
YLRDPDDNGV ELYRDRPEAE WPRSADGALS MFTRRLDLDD LLRTRVA
|
|---|
| |