| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4673 |
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| Symbol | |
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| ID | 3912491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5286022 |
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| End bp | 5287047 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637886578 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_488267 |
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| Protein GI | 86751771 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.562067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCC GCAAGGGCCT GCTGATCGGC CTCGGCGTCG CCGCCGTGGT CGCCGCCGCC
GCCGTCACCT ACGAGCGCTA CGACACCAAG ACGCTGAAGC GCACGATCCG CCGCGACGCC
GTGCTGTGCG GCGTCAACAA GGGCCTGCCG GGCTTCTCGA CGCCGGACGA AAAAGGCAAC
TGGACCGGTT TCGACGTCGA TTTCTGCCGC GCGGTGGCGG CGGCGATCTT CAACGATCCG
AACAAGGTGA AATTCGTGCC GCTCGACGCC AACGAGCGCT TCAAGGAATT GCAGAGCCGC
AAGGTCGACA TCCTGTCGCG CAATTCGACC TGGAGCATGT CGCGCGAGGC CGGCTACGAA
TTGTACTTCC CGGCGGTCGC CTATTACGAC GGCGAGGGCT TCATGGTGCC GTCGTCGCGC
AAGATCGAGA CCGCGCTCGA ACTCGACGGC AGCAAGGTCT GCGTCCAGGC CGGCACCACC
ACTTTGCTCA ACCTTGCCGA CTACTTCCGC GCCAACAACA TGAAGTATCA GGAGGTCAAG
TTCCCCAAGC TCGACGAGGT GGTCGCCGCC TACAACAGCG GACAATGCGA CACCTTCTCC
GCCGACGCCT CGCAGCTCTA TGCGCTGCGC CAGACGCTCG CCAAACCGGG CGATCACGTC
ATCCTGCCGG ACCTGATCTC CAAGGAGCCG CTGGCGCCGG TGGTCCGCCA GCGCGACGAC
GAATGGATGA TGATCGTGAA ATGGTCGCTC TACGCGATGA TCAACGCCGA GGAACTCGGC
GTCACCTCGG CGAATATCGA CGAGGCGCTG AAGTCGAAGA AGCCGGACGT GATGCGGCTG
GTCGGCACCG AGGGCGCCTA TGGCGAGGAG CTCGGCCTCA GCAAGGACTG GGCGGCGCGG
ATCATCCGCC ACGTCGGCAA TTACGGCGAG GTCTACGACC GTAATGTCGG CAAGCTCGGC
ATCCCGCGTG GCCTGAACCA GCTCTGGAGC GCCGGCGGCA TCCAATACGC GCCGCCGATC
AGGTAG
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| Protein sequence | MSFRKGLLIG LGVAAVVAAA AVTYERYDTK TLKRTIRRDA VLCGVNKGLP GFSTPDEKGN
WTGFDVDFCR AVAAAIFNDP NKVKFVPLDA NERFKELQSR KVDILSRNST WSMSREAGYE
LYFPAVAYYD GEGFMVPSSR KIETALELDG SKVCVQAGTT TLLNLADYFR ANNMKYQEVK
FPKLDEVVAA YNSGQCDTFS ADASQLYALR QTLAKPGDHV ILPDLISKEP LAPVVRQRDD
EWMMIVKWSL YAMINAEELG VTSANIDEAL KSKKPDVMRL VGTEGAYGEE LGLSKDWAAR
IIRHVGNYGE VYDRNVGKLG IPRGLNQLWS AGGIQYAPPI R
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