| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4671 |
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| Symbol | |
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| ID | 3912489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5284188 |
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| End bp | 5285192 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886576 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_488265 |
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| Protein GI | 86751769 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.297118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACG ATCTCGCGAC CATCTGGGCC CTCATCATCG CGTTCGCGGT GTTCGTCTAT
GTGGTGATGG ACGGCTTCGA CCTCGGCCTC GGCATTCTGT TTCCGCTGTT TCGCACCAAG
CGCGACCGCG ATGTCGTGAT GAACAGCGTC GCGCCGGTGT GGGACGGCAA CGAGACCTGG
CTGGTGCTCG GCGGCGGCGG CCTGTTCGCG GCGTTTCCGC TGGCCTATGC GGTGCTGATG
CCGGCGCTGT ATACGCCGAT CATCGCGATG CTGCTCGGCC TGGTGTTTCG CGGCGTCGCG
TTCGAATTTC GCTGGCGCAG CCTGCGCGAG CGCAACCGCT GGGACCTCGC CTTCTTCCTC
GGCTCGCTGA TCGCGACGCT GGCGCAGGGC ATCGCGCTCG GCGCGATCCT GCAAGGCGTC
GCTGTCGAGG GTCGCGCCTA TGCGGGCGGA TGGTGGGACT GGCTGACGCC GTTCAGCGTG
CTGACCGGGC TGGCGCTGGT GACCGGCTAC GCGCTGCTCG GCGCCACCTG GCTGGTGATG
AAGACCACCG GCGAACTGCG CGACCAGGCC TATCGGCTGA GCCGCTGGCT GCTGCTGGCG
ATGCTGATCG CGATCGTCGC CGTCAGCGCC GCGACGCCGT TCCTGAGCTA CGACTATTCG
GAACGCTGGT TCGCCTGGCC GAACGTGCTC GCCACCGCGC AAGTGCCGCT CGCCGTGGCG
ATCGTCACCG CGCTGCTGCT GCGGGCGCTG ACGCAGCGCC GCGACTACCA GCCGTTCCTG
CTGACGCTGT GCCTGTTCGC GCTGTCCTAT GCCGGGCTCG GCATCAGCAT CTGGCCCTAT
GTGGTGCCGC GGAGCATCAC CGTCTGGCAG GCGGCGGCGC CCGAGAGCAG CCAGCTCTTC
ATGCTGGTCG GCGTCGCGAT CCTGGTGCCG ATCATCCTCG TCTACACAGC CTGGGCCTAT
TGGGTGTTTC GCGGCAAGGT CGACCCCGAC AGCGGCTATC ATTGA
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| Protein sequence | MDYDLATIWA LIIAFAVFVY VVMDGFDLGL GILFPLFRTK RDRDVVMNSV APVWDGNETW
LVLGGGGLFA AFPLAYAVLM PALYTPIIAM LLGLVFRGVA FEFRWRSLRE RNRWDLAFFL
GSLIATLAQG IALGAILQGV AVEGRAYAGG WWDWLTPFSV LTGLALVTGY ALLGATWLVM
KTTGELRDQA YRLSRWLLLA MLIAIVAVSA ATPFLSYDYS ERWFAWPNVL ATAQVPLAVA
IVTALLLRAL TQRRDYQPFL LTLCLFALSY AGLGISIWPY VVPRSITVWQ AAAPESSQLF
MLVGVAILVP IILVYTAWAY WVFRGKVDPD SGYH
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