Gene RPB_4647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4647 
Symbol 
ID3912464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5254857 
End bp5255477 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID637886551 
Productpotassium-transporting ATPase subunit C 
Protein accessionYP_488241 
Protein GI86751745 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAG AAATCCGTCC CGCGATCGTG TCGTTCGCAG CGCTCGCCTG CCTCACCGGC 
CTGATCTATC CGCTGGCGAT GACCGGCATC GCGCAGGTCG CCTTCCCGAC CCAGGCCAAT
GGCAGCCTGA TCACGCAGAA CAACCAGGTG ATCGGCTCCG CGCTGATCGG CCAATCGTTC
ACCGAGCCCA AGTACTTCCA CGGCCGGCCG TCTGCGACCA CCGCGCCGGA TCCGCAGGAT
CCGGCCAAGT CGGTACCTGC CCCCTACAAT GCCGCCAACT CGATGGGCTC CAATCTCGGC
CCGACCAGCA AGGCGCTCGC CGACCGGCTT GCGAGCGACA TGGCGGCGCT CAAGCAGGAA
AATCCCGGCG CGGCGGTCCC GGTCGATCTC GTGACCACCT CCGGCAGCGG CCTCGATCCC
GACGTCTCGC CGGAGGCGGC GCTGTTCCAG GTGCCGCGCG TCGCCAAAGC CCGCAATCTG
CCCGAAGCCA GGGTGCGCGC CCTGGTGGAA AGCCAGGCCA CCGGCCGCGA TCTCGGCGTC
CTCGGCGAGC CGCGCGTCAA CGTACTGAAA TTAAACCTGG CCCTCGATAA GATGCAGGCA
CAGAACCAGC CGGGCTCCTG A
 
Protein sequence
MLKEIRPAIV SFAALACLTG LIYPLAMTGI AQVAFPTQAN GSLITQNNQV IGSALIGQSF 
TEPKYFHGRP SATTAPDPQD PAKSVPAPYN AANSMGSNLG PTSKALADRL ASDMAALKQE
NPGAAVPVDL VTTSGSGLDP DVSPEAALFQ VPRVAKARNL PEARVRALVE SQATGRDLGV
LGEPRVNVLK LNLALDKMQA QNQPGS