Gene RPB_4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4646 
Symbol 
ID3912463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5252769 
End bp5254838 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content67% 
IMG OID637886550 
Productpotassium-transporting ATPase subunit B 
Protein accessionYP_488240 
Protein GI86751744 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGA AACTCCGCAA ACGGACCGCC GCCTCGGCCA TGCTCGATCC GGCGATCCTG 
CTCCCCGCGA TCGGTCACGC CTTCGTCAAG CTCGATCCGC GGACCCTGAT CAAGAACCCG
GTGATGTTCG TCCTCGAAGT CGTCACAGTG CTCACGACGA TCCTGACGAT CCGCAACATC
GTTGCCGGCA ACGGCAGTCT CGGCTTCGAC CTTCAGATCA CCATCTGGCT GTGGTTCACG
ATCTTGTTCG CCAATTTCGC CGAAGCCGTC GCCGAAGGCC GCGGCAAGGC GCAGGCCGAC
ACCCTGCGCC AGACCCGGGC CTCCACGGTC GCCAAGCGGC TGCTGATGCC GGACAATCAC
GAGCTCTACG AGGGCGTCGC CGCCGAACAT CTCAAGGTCG GCGACCTGGT GCTGTGCGAG
GCAGGCGACA CCATCCCGGG CGACGGCGAC ATCATCGAAG GCATCGCCTC GGTCAACGAG
GCCGCAGTGA CCGGCGAATC CGCCCCGGTG ATCCGCGAAT CCGGCGGCGA CCGCTCTGCG
GTCACCGGCG GCACCAATGT GATCTCGGAC CGCATCGTCG TGAAGATCAC CGCGGCGGCC
GGTTCGTCGT TTCTCGACCG CATGATCGGA CTGGTCGAAG GCGCCGAGCG CCAGAAGACG
CCGAACGAGA TCGCCCTCAA CATCCTGCTG GTCGGCCTCA CCATCATCTT CGTGTTCGCC
ACCGTGACCA TTCCGAGTTT CGCGACCTAC GCCGGCGGCT CGATCTCGGT GATCGTGCTG
GTGGCGCTGT TCGTGACGCT GATCCCGACC ACGATCGGCG CGCTGCTGTC GGCGATCGGC
ATCGCCGGCA TGGACCGGCT GGTGCGCTTC AATGTGCTGG CGATGTCCGG TCGCGCGGTG
GAGGCCGCCG GCGACATCGA TACGCTGCTG CTCGACAAGA CCGGCACCAT CACCTTCGGC
AATCGCCTGG CCTCGGAAAT CATCCCGGTG CCGGGCGTCA GCGACACCGA GGCGGCGGAG
GCCGCGCTGC TGGCGAGCCA GGCCGATGAG ACCGCGGAAG GCCGCTCGAT CGTGACGCTG
GCGCAAGAGA AGCACGGCCT CGCCAACGTT GCGGTGCCCG GCGCCGCGAG TTTCATCGCG
TTCTCGGCGA TGACGCGGCT GTCCGGCGTC GATCTCGACG GGCGCAACCT GCGCAAGGGT
GCGGTCGATT CGATCCTGAA ATTCGTCCGC GACGAATCCG GCGCCGATAT CGCCGAGCCG
CCGGCGTTCC GCGCGGCGGT CGACCGCATC GCCCGCGCCG GCGGAACACC GCTTGGACTG
GCGGAAGGCG GTCGGCTGCT CGGCGTCATC CACCTCAAGG ACGTGGTCAA GCCGGACGTC
AAGGAGCGCT TCGCGGCGCT GCGCCGGATG GGGATCAAGA CGGTGATGAT CACCGGCGAC
AATCCGGTCA CCGCGGCCTC GATCGCCTCG GAAGCCGGCG TCGACGACTT CATCGCGCAG
GCCACCCCCG AGGACAAGCT GCGCTACATC CGCAGCGAGC AGGCCAACGG CCGGCTGATC
GCGATGTGCG GCGACGGCAC CAACGACGCC CCCGCACTGG CGCAAGCCGA CGTCGGCGTG
GCGATGCAGA GCGGCACCCA GGCGGCGCGC GAGGCCGGCA ACATGGTGGA CCTCGACTCC
GACCCGACCA AGCTGATCGA GGTGGTGGAG ATCGGAAAAC AGCTTCTGAT GACGCGCGGT
GCGCTGACCA CCTTTTCGAT CGCCAACGAC GTCGCCAAAT ATTTCGCCAT CATCCCGGCG
ATGTTCGTGG CGTTCTACCC GCAACTCGGC GCGCTCAACG TGATGGGGCT GTCGACGCCG
CAGAGCGCGA TCCTGTCGGC GATCGTGTTC AACGCGCTGA TCATCATCGC GCTGATCCCC
CTGGCCCTGA AGGGCGTGAC CTATCGCCCC GTCGGCGCGG CGGCGCTGCT GCGGCGCAAT
CTGCTGATCT ACGGCCTCGG CGGCCTGGTG CTGCCGTTCA TCGGAATCAA GGTCATCGAT
CTCGCGGTGA CCGCCCTGCA TCTCGCCTGA
 
Protein sequence
MQAKLRKRTA ASAMLDPAIL LPAIGHAFVK LDPRTLIKNP VMFVLEVVTV LTTILTIRNI 
VAGNGSLGFD LQITIWLWFT ILFANFAEAV AEGRGKAQAD TLRQTRASTV AKRLLMPDNH
ELYEGVAAEH LKVGDLVLCE AGDTIPGDGD IIEGIASVNE AAVTGESAPV IRESGGDRSA
VTGGTNVISD RIVVKITAAA GSSFLDRMIG LVEGAERQKT PNEIALNILL VGLTIIFVFA
TVTIPSFATY AGGSISVIVL VALFVTLIPT TIGALLSAIG IAGMDRLVRF NVLAMSGRAV
EAAGDIDTLL LDKTGTITFG NRLASEIIPV PGVSDTEAAE AALLASQADE TAEGRSIVTL
AQEKHGLANV AVPGAASFIA FSAMTRLSGV DLDGRNLRKG AVDSILKFVR DESGADIAEP
PAFRAAVDRI ARAGGTPLGL AEGGRLLGVI HLKDVVKPDV KERFAALRRM GIKTVMITGD
NPVTAASIAS EAGVDDFIAQ ATPEDKLRYI RSEQANGRLI AMCGDGTNDA PALAQADVGV
AMQSGTQAAR EAGNMVDLDS DPTKLIEVVE IGKQLLMTRG ALTTFSIAND VAKYFAIIPA
MFVAFYPQLG ALNVMGLSTP QSAILSAIVF NALIIIALIP LALKGVTYRP VGAAALLRRN
LLIYGLGGLV LPFIGIKVID LAVTALHLA