Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4633 |
Symbol | |
ID | 3912450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5235830 |
End bp | 5236867 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637886537 |
Product | inner-membrane translocator |
Protein accession | YP_488227 |
Protein GI | 86751731 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACACCA CGATATTCCT GTTTCTCTTG CAGGACGGCA TCATCAACGG TGCGGTCTAT GCGTTGGTCG CCATTGCGCT GGTGCTGGTG TTCGCGGTGA CGCGCGTCAT CCTGGTGCCG CAGGGCGAAT TCGTCGCGTT CACCGCGTTG ACCATCGCGG CGCTGGAGAA CGGCGTCGCG CCGGCGACGC CGTGGCTGCT GCTGGCGCTC GGATGTCTCG CGGCCGCGTC CGAGCTGATC CGCCATTTTC GCGATCTGAC GCTGCGCCGC GTCGCCCGGA TCATGCTGTT CGACCTGGCG CTGCCGGTCG CGCTGCTGCT GCTCACGCAG GCTCTGGCGC CGATGAAGAT CGGGCAGGTC GGCAGCATCC TGCTTGCGAT CGCCCTGATC ATGCCGATGG GCCCGATGCT GTACCGCATC GCGTTCGAGC CGATCGCGCA TGCCAGTGTG CTGGTGCTGC TGATGGCGTC GTTCGGCGTG CATTTCTCGC TGATGGGGCT GGGGCTGTTG TTCTTCGGTC CGGAAGGCAC CGGCACCACG CCGCTGTCGT CGCAATCCTT TTCGCTGGGC GAATTGCTGA TCACAGGCCA GAGCGTCGCG GTGCTGGTGG TGACCGCCGT GCTGCTGGCG ATGTTCGCCT TGTTCTTCGG CCGGACGTTG CTCGGCAAGG CTCTCAAGGC GTGCTCGTCG AACCGGACCG GCGCGCGGCT TGTCGGCATC CCGATTTCGG CGGCGGGGCA GATCGCCTTC GCCCTCGCCG CGCTAATCGG CGCGGTGTCG GGCGCGCTGG TCGGGCCTCT GATGACGGTG GCTTATGATT CCGGCTTCCT GATCGGGCTG AAGGCGTTCG TCGCCGCCAT CCTCGGCGGG CTGGTGAGCT ATCCGCTGAC GGTGCTGGCG GCGCTCACGG TGGGATTTGC AGAGGCGCTG TTTTCGTTCT GGGCCAGCAA TTTCAAGGAA GTTCTGGTGT TCACGCTGAT CATTCCGGTG CTCGCCTGGC GTTCGATCGT GGCACCGCAT GCCGAGGAAT CGGAATGA
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Protein sequence | MDTTIFLFLL QDGIINGAVY ALVAIALVLV FAVTRVILVP QGEFVAFTAL TIAALENGVA PATPWLLLAL GCLAAASELI RHFRDLTLRR VARIMLFDLA LPVALLLLTQ ALAPMKIGQV GSILLAIALI MPMGPMLYRI AFEPIAHASV LVLLMASFGV HFSLMGLGLL FFGPEGTGTT PLSSQSFSLG ELLITGQSVA VLVVTAVLLA MFALFFGRTL LGKALKACSS NRTGARLVGI PISAAGQIAF ALAALIGAVS GALVGPLMTV AYDSGFLIGL KAFVAAILGG LVSYPLTVLA ALTVGFAEAL FSFWASNFKE VLVFTLIIPV LAWRSIVAPH AEESE
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