Gene RPB_4633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4633 
Symbol 
ID3912450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5235830 
End bp5236867 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID637886537 
Productinner-membrane translocator 
Protein accessionYP_488227 
Protein GI86751731 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACCA CGATATTCCT GTTTCTCTTG CAGGACGGCA TCATCAACGG TGCGGTCTAT 
GCGTTGGTCG CCATTGCGCT GGTGCTGGTG TTCGCGGTGA CGCGCGTCAT CCTGGTGCCG
CAGGGCGAAT TCGTCGCGTT CACCGCGTTG ACCATCGCGG CGCTGGAGAA CGGCGTCGCG
CCGGCGACGC CGTGGCTGCT GCTGGCGCTC GGATGTCTCG CGGCCGCGTC CGAGCTGATC
CGCCATTTTC GCGATCTGAC GCTGCGCCGC GTCGCCCGGA TCATGCTGTT CGACCTGGCG
CTGCCGGTCG CGCTGCTGCT GCTCACGCAG GCTCTGGCGC CGATGAAGAT CGGGCAGGTC
GGCAGCATCC TGCTTGCGAT CGCCCTGATC ATGCCGATGG GCCCGATGCT GTACCGCATC
GCGTTCGAGC CGATCGCGCA TGCCAGTGTG CTGGTGCTGC TGATGGCGTC GTTCGGCGTG
CATTTCTCGC TGATGGGGCT GGGGCTGTTG TTCTTCGGTC CGGAAGGCAC CGGCACCACG
CCGCTGTCGT CGCAATCCTT TTCGCTGGGC GAATTGCTGA TCACAGGCCA GAGCGTCGCG
GTGCTGGTGG TGACCGCCGT GCTGCTGGCG ATGTTCGCCT TGTTCTTCGG CCGGACGTTG
CTCGGCAAGG CTCTCAAGGC GTGCTCGTCG AACCGGACCG GCGCGCGGCT TGTCGGCATC
CCGATTTCGG CGGCGGGGCA GATCGCCTTC GCCCTCGCCG CGCTAATCGG CGCGGTGTCG
GGCGCGCTGG TCGGGCCTCT GATGACGGTG GCTTATGATT CCGGCTTCCT GATCGGGCTG
AAGGCGTTCG TCGCCGCCAT CCTCGGCGGG CTGGTGAGCT ATCCGCTGAC GGTGCTGGCG
GCGCTCACGG TGGGATTTGC AGAGGCGCTG TTTTCGTTCT GGGCCAGCAA TTTCAAGGAA
GTTCTGGTGT TCACGCTGAT CATTCCGGTG CTCGCCTGGC GTTCGATCGT GGCACCGCAT
GCCGAGGAAT CGGAATGA
 
Protein sequence
MDTTIFLFLL QDGIINGAVY ALVAIALVLV FAVTRVILVP QGEFVAFTAL TIAALENGVA 
PATPWLLLAL GCLAAASELI RHFRDLTLRR VARIMLFDLA LPVALLLLTQ ALAPMKIGQV
GSILLAIALI MPMGPMLYRI AFEPIAHASV LVLLMASFGV HFSLMGLGLL FFGPEGTGTT
PLSSQSFSLG ELLITGQSVA VLVVTAVLLA MFALFFGRTL LGKALKACSS NRTGARLVGI
PISAAGQIAF ALAALIGAVS GALVGPLMTV AYDSGFLIGL KAFVAAILGG LVSYPLTVLA
ALTVGFAEAL FSFWASNFKE VLVFTLIIPV LAWRSIVAPH AEESE