Gene RPB_4632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4632 
Symbol 
ID3912449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5234061 
End bp5235833 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content69% 
IMG OID637886536 
ProductABC transporter ATPase component 
Protein accessionYP_488226 
Protein GI86751730 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCC CCGCGCCCCG GCTCGTCAGC GCGGCGATTG CCGTCGCTCT CCTGATCCTT 
CCGTTCAGCG GGCTGATGCC GGACTACTGG ATCACGCTGT TCAACTATAT CGGCATCTCC
AGCCTGGTGG CGATCGGTCT GGTTCTGCTC ACCGGCGTCG GCGGCATGAC CTCGTTCGGC
CAAGCGGCGT TCGTCGGCTT CGGCGCCTAC ACCACCGGCG TGCTGACCGT GTATTACGGC
ATTTCGCCCT GGCTGACGCT GCCGGCTTCG ATCCTCGTCA CCATGGTGGC GGCGCTGGCG
GTCGGCGCGA TCACGGTGCG CCTGTCCGGT CACTATCTGC CGCTCGGCAC CATCGCCTGG
GGCATCGCGT TCTTCTATCT GTTCGGCAAT CTGAGCTGGC TCGGCGCCCA TGACGGCCTG
CCGGGAATCC CGGCGCTGAA GATCGGCGAC TACGCCCTGA TCGCGCCGCG CGATTATTTC
GTCGTGGTGT GGATCGCCGT GGTGCTGGCG GTGATCGCCA CGCAGAATCT GCTGAGCGGC
CGGGTCGGCC GTGCAGTGCG GGCGCTGCGG CGCTCGACGC GCGCCGCCGA GGCGTTCGGC
GTCAACACCG CCGGCGCCAA GCTGATGGTG TTCGTCTATG CGGCGATGCT GGCGGGTCTC
GCCGGCTGGC TCTACGCGCA TTTCCAGCGC TCGGTGTCGC CGGGCCCTTT CGGCATCACC
GCCGGAACCG AATATCTGCT GATGGCCGTG CTCGGCGGCG CGGGGCGCGT CTACGGCGCG
ATCCTCGGCG CGGCTGGCAT CACCTTCCTG CGCGATCAGT TGCAGGATTG GTTGCCCCGG
CTGCTCGGCC ACACCGGCAA TTTCGAGATC ATCGCTTTCG GCGCGGTGCT GGTGCTGCTG
CTGCAGACCG CGCCCGGCGG GCTGTGGCCG ATCCTGTTCG GTCCGCCGCC GGCCCCGAAA
CTGCCGCCGC CGGACGAGGG GGACCGCCTG CCGACCCGTG CACTGCCAGC GCCCGGCACG
AAGCTGCTGC AGGCCGATCA GGCGCGCAAG AGTTTCGGCG GCCTGGTGGC GGTCAACGAT
GTGAACTTCG AGGTCGACAG CGGCCGGATC ATCGGCCTGA TCGGGCCGAA CGGCGCCGGC
AAGAGTACCA CCTTCAACTT GATCACCGGC GTGTTGCCGC TGACATCGGG GCGGATCGCG
TTCGAGGGTC ATCCGTTGCA GGCGCAGACG CCGCAGCGCG CGGCAACGCT CGGGCTCGGC
CGTACTTTCC AGCATGTCGA GATCGTCGCC GACATGAGCG TGATCGAGAA CGTCGCGCTC
GGCGCGCATT TGCGCGGCCG GGCGGGTGTG CTGCGCGCGA TCCTTCGGCT CGATCGCGCC
GAGGAGGCGC TGTTGCTCGA CAGTGCGATG CGCGCGCTGG CGCGGGTCGG CCTCGCCGAT
GTCGCGTACG AGCCGGCGGG TACGCTGGCG CTCGGGCAGC TTCGCCTCGT CGAGGTCGCG
CGTGCGCTGT GCCTCGAGCC GGTGCTGCTG CTGCTCGACG AGCCGGCCGC GGGGCTGCGT
GTCGGCGAGA AGAAGGCGCT GGCCAAGCTG CTGCGCGAGG TCCGCAGCGA AGGCATGAGT
GTGCTGCTGG TCGAGCACGA CATGGACTTC GTCATGAGTC TCGCCGATCG GCTCGTGGTG
CTCGATTTCG GCACCAAGAT CGCCGAGGGG GCGCCTGTGG CGATCCGTCA GGACCCCGCC
GTACTCGAGG CCTATCTCGG AGGCGTGTCG TGA
 
Protein sequence
MKLPAPRLVS AAIAVALLIL PFSGLMPDYW ITLFNYIGIS SLVAIGLVLL TGVGGMTSFG 
QAAFVGFGAY TTGVLTVYYG ISPWLTLPAS ILVTMVAALA VGAITVRLSG HYLPLGTIAW
GIAFFYLFGN LSWLGAHDGL PGIPALKIGD YALIAPRDYF VVVWIAVVLA VIATQNLLSG
RVGRAVRALR RSTRAAEAFG VNTAGAKLMV FVYAAMLAGL AGWLYAHFQR SVSPGPFGIT
AGTEYLLMAV LGGAGRVYGA ILGAAGITFL RDQLQDWLPR LLGHTGNFEI IAFGAVLVLL
LQTAPGGLWP ILFGPPPAPK LPPPDEGDRL PTRALPAPGT KLLQADQARK SFGGLVAVND
VNFEVDSGRI IGLIGPNGAG KSTTFNLITG VLPLTSGRIA FEGHPLQAQT PQRAATLGLG
RTFQHVEIVA DMSVIENVAL GAHLRGRAGV LRAILRLDRA EEALLLDSAM RALARVGLAD
VAYEPAGTLA LGQLRLVEVA RALCLEPVLL LLDEPAAGLR VGEKKALAKL LREVRSEGMS
VLLVEHDMDF VMSLADRLVV LDFGTKIAEG APVAIRQDPA VLEAYLGGVS