Gene RPB_4631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4631 
Symbol 
ID3912448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5233339 
End bp5234064 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID637886535 
ProductABC transporter related 
Protein accessionYP_488225 
Protein GI86751729 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.723682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGG CCCTCCTCGA CGTGCAGAAC GTCAGCGTCG CGTATGGCCG CGCCGAGGTG 
GTGCACGACG TTTCGCTCAA GGTCGAGCAA GGTGCGCTGG TGACCGTGAT CGGCGCCAAT
GGCGCCGGCA AGACCACCCT GCTCAACGCC ATCATGGGCC TGCTGAAAGC GCGCGGCCGG
ATCGGCTTCC GCGGTGAGGA CGTCAGCAGC GTCATGCTGG AATCGCGGGT CAAGGCGGGA
CTTTGTCTCG TACCGGAGCG GCGCGAGCTG TTCGCCGACA TGGCGGTCGA GGACAATCTG
CTGCTCGGTG GCTTTCGCAG GAGCCGCGCA GAGCGCAAGA CAACGATCGA GGAGATCTAT
AGCCGGCTGC CGCGGCTGAA GGAGCGACGT GTGCAACTCG CCGGCACGCT GTCCGGCGGC
GAACGGCAGA TGCTGGCGAT GGGGCGGGCG TTGATGGCGC GGCCGACGCT GCTGATGCTG
GACGAGCCGA GCCTCGGGCT GGCGCCGCGA ATTGTGCGCG ACGTGTTCCA CATTCTCACC
GATCTGCGCA CGACCGGCGT GTCGATCCTG CTGGTCGAGC AGAATGCCCG CGCCGCGCTG
GAAGTCGCGG ACTACGCCTA CGTCATGGAG CTCGGCGCCA TCACCAAGCA GGGCTCTCCG
GCGGACATCG CCCAGGATCC GAGACTGGTC GAAAGCTATC TCGGCCTCGG CGGGCACGAG
TACTGA
 
Protein sequence
MTAALLDVQN VSVAYGRAEV VHDVSLKVEQ GALVTVIGAN GAGKTTLLNA IMGLLKARGR 
IGFRGEDVSS VMLESRVKAG LCLVPERREL FADMAVEDNL LLGGFRRSRA ERKTTIEEIY
SRLPRLKERR VQLAGTLSGG ERQMLAMGRA LMARPTLLML DEPSLGLAPR IVRDVFHILT
DLRTTGVSIL LVEQNARAAL EVADYAYVME LGAITKQGSP ADIAQDPRLV ESYLGLGGHE
Y