| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4626 |
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| Symbol | |
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| ID | 3912443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5226683 |
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| End bp | 5227558 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886530 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_488220 |
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| Protein GI | 86751724 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTC GTGTACCCGG CCTGTCGCGC CGCTCGATCA CCACCATCGC CGCTTTGATC
GGCGTGGTGT CGCTGGCGAT CGGGGCGCAT GCCGCGCTGA ACAAGCGCGT CGGCGATCCG
AACGGCAGCA AGGATGTCGC CCGGATCGAC GGCTCCGGCC CGGCCGCGTC GCGTTTTGCG
CTGGTGATCG GCAACGGCCG CTATCCGGAT GCGTCGCAGC CGATGGTGCA ACCGATCAAC
GATGCGCGCG CGCTCAGCGG AGCGTTGCGT CGCGAGGGTT TCGACGTCGA CATGATCGAG
GATGCCAACC GCGACGATCT GCTCCAGGCG ATCGAGCGGA TGAAGTCCCG CGTCACCAAG
GATTCCACCG TCGTGCTGTT CTTCGGCGGC TATGGCATCC AGTCCGGCCG CGAGAGCTAC
ATGATCCCGG TCGACGCCCG GATCTGGAAC GAGGCCGATG TCCGCCGCAC CGGTATCAGC
ATCGAATCCG TGCTCGGCGC GATGCAGGAG CGCGGCGTGC AAGCCAAGCT CGCGATCGTC
GACGCCTCGC GCCGCAATCC CTATGAGCGC CGCTTCCGTG CCTATTCGCA TGGTCTTGCG
CCGATCAATG CGCCGGCCAA CGCGCTGGTG CTGTCATCGT CGACGCCCGG CAAGGTCGCC
GAGGACGGCG ACGGCCAGAA CAGCATCCTC GTCGGGGCGC TGCTCGGCTC GATCTCGTCT
CGCGTCGTCA GCGCCGAAGC CGCTTTCACC AAGGCGCGGC TCGCCGTCAC GCGCGCGACC
AACGGCGCGC AAGTGCCGTC GCTGTCGTCC TCGCTGGTCG ACGACGTCAC CCTGGCGCCG
GTCACCGCCG ATGCAACCCC GGCGAGCGGC GGCTGA
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| Protein sequence | MTFRVPGLSR RSITTIAALI GVVSLAIGAH AALNKRVGDP NGSKDVARID GSGPAASRFA
LVIGNGRYPD ASQPMVQPIN DARALSGALR REGFDVDMIE DANRDDLLQA IERMKSRVTK
DSTVVLFFGG YGIQSGRESY MIPVDARIWN EADVRRTGIS IESVLGAMQE RGVQAKLAIV
DASRRNPYER RFRAYSHGLA PINAPANALV LSSSTPGKVA EDGDGQNSIL VGALLGSISS
RVVSAEAAFT KARLAVTRAT NGAQVPSLSS SLVDDVTLAP VTADATPASG G
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