Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4626 |
Symbol | |
ID | 3912443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5226683 |
End bp | 5227558 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886530 |
Product | peptidase C14, caspase catalytic subunit p20 |
Protein accession | YP_488220 |
Protein GI | 86751724 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTTC GTGTACCCGG CCTGTCGCGC CGCTCGATCA CCACCATCGC CGCTTTGATC GGCGTGGTGT CGCTGGCGAT CGGGGCGCAT GCCGCGCTGA ACAAGCGCGT CGGCGATCCG AACGGCAGCA AGGATGTCGC CCGGATCGAC GGCTCCGGCC CGGCCGCGTC GCGTTTTGCG CTGGTGATCG GCAACGGCCG CTATCCGGAT GCGTCGCAGC CGATGGTGCA ACCGATCAAC GATGCGCGCG CGCTCAGCGG AGCGTTGCGT CGCGAGGGTT TCGACGTCGA CATGATCGAG GATGCCAACC GCGACGATCT GCTCCAGGCG ATCGAGCGGA TGAAGTCCCG CGTCACCAAG GATTCCACCG TCGTGCTGTT CTTCGGCGGC TATGGCATCC AGTCCGGCCG CGAGAGCTAC ATGATCCCGG TCGACGCCCG GATCTGGAAC GAGGCCGATG TCCGCCGCAC CGGTATCAGC ATCGAATCCG TGCTCGGCGC GATGCAGGAG CGCGGCGTGC AAGCCAAGCT CGCGATCGTC GACGCCTCGC GCCGCAATCC CTATGAGCGC CGCTTCCGTG CCTATTCGCA TGGTCTTGCG CCGATCAATG CGCCGGCCAA CGCGCTGGTG CTGTCATCGT CGACGCCCGG CAAGGTCGCC GAGGACGGCG ACGGCCAGAA CAGCATCCTC GTCGGGGCGC TGCTCGGCTC GATCTCGTCT CGCGTCGTCA GCGCCGAAGC CGCTTTCACC AAGGCGCGGC TCGCCGTCAC GCGCGCGACC AACGGCGCGC AAGTGCCGTC GCTGTCGTCC TCGCTGGTCG ACGACGTCAC CCTGGCGCCG GTCACCGCCG ATGCAACCCC GGCGAGCGGC GGCTGA
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Protein sequence | MTFRVPGLSR RSITTIAALI GVVSLAIGAH AALNKRVGDP NGSKDVARID GSGPAASRFA LVIGNGRYPD ASQPMVQPIN DARALSGALR REGFDVDMIE DANRDDLLQA IERMKSRVTK DSTVVLFFGG YGIQSGRESY MIPVDARIWN EADVRRTGIS IESVLGAMQE RGVQAKLAIV DASRRNPYER RFRAYSHGLA PINAPANALV LSSSTPGKVA EDGDGQNSIL VGALLGSISS RVVSAEAAFT KARLAVTRAT NGAQVPSLSS SLVDDVTLAP VTADATPASG G
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