Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4616 |
Symbol | |
ID | 3912433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5216818 |
End bp | 5217873 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637886520 |
Product | putative mRNA 3-end processing factor |
Protein accession | YP_488210 |
Protein GI | 86751714 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGA TGCGCCCGCA AGACATCCTG ATGCCCCAAG CCGAAGGCCT GTGCTGCAAG CCAGGGGGCT TCCACATCGA CCCGGTGCGG CCGGTCGAAC GGGCCGTGAT CACGCATGGC CATTCCGACC ACGCCCGGCC CGGCCACGGC GCGGTGCTGG CGACGCAGGA AACGCTCGAC ATGATGCGGC TGCGCTACGG CGAAAATTTC GCCGGCAGCA CGCAGGCGAT CGGCTACGGC GAAACGATCC GGCTCGGCGA GACGACAGTG ACCTTCCATC CGGCCGGCCA CGTGCTCGGT TCGGCGCAGG TGGCGGTCGA ATGCGGCGGC CTCCGGATCG TTGCCTCCGG CGACTACAAG GACGCGCCGG ACCCGACCTG CACGCCTTTC GAACTCGTCC GGTGCGACGT CTTCATCACC GAGGCGACCT TCGGGCTGCC GGTATTTCGC CATCCCGACG CAACCGGGGA AGTGCGCAAG CTGCTCGGAT CCGTCGCGCT GTTTCCGGAG CGCGCACATC TGGTCGGCGC GTACTCGCTG GGCAAGGCGC AGCGGGTGAT CGCACTGATC CGCGATGCCG GCTATGATGC ACCGATCTAT CTGCACGGCG CGATGGAGAA GATCACGCGT TACTATGCCC AGCGCGGTTT GCCGCTCGGC GAGCTGCGGC CGGTCAAGGG GGTGAAGAAG GCCGAGCTCG CCGGCACCAT CACGCTGGCG CCGCCGTCCG CGACGTCCGA TCTGTGGACG CGGCGCTTCC CCGATCCGCT CACAGCCTTC GCCTCCGGCT GGATGCGGGT GCGCGCCCGC GCGAGGCAGC GCGGCGTCGA GCTGCCGCTG GTGATTTCCG ACCACGCCGA CTGGGACGGC CTGACCGCGA CCATCGCCGC AACGGGCGCC GGCGAAGTCT GGGTCACCCA CGGCCAGGAA GACGCGCTGG TGCATTGGTG CCAGCGCAAG GGCCTCACCG CGCGCCCGCT CGATCTGGTC GGCTACGGTG ACGAAGACGA AGACGTCGGC CTGGCGGCGG GCGAGACCGA GGCCGCCGAG GCATGA
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Protein sequence | MSSMRPQDIL MPQAEGLCCK PGGFHIDPVR PVERAVITHG HSDHARPGHG AVLATQETLD MMRLRYGENF AGSTQAIGYG ETIRLGETTV TFHPAGHVLG SAQVAVECGG LRIVASGDYK DAPDPTCTPF ELVRCDVFIT EATFGLPVFR HPDATGEVRK LLGSVALFPE RAHLVGAYSL GKAQRVIALI RDAGYDAPIY LHGAMEKITR YYAQRGLPLG ELRPVKGVKK AELAGTITLA PPSATSDLWT RRFPDPLTAF ASGWMRVRAR ARQRGVELPL VISDHADWDG LTATIAATGA GEVWVTHGQE DALVHWCQRK GLTARPLDLV GYGDEDEDVG LAAGETEAAE A
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