Gene RPB_4611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4611 
Symbol 
ID3912428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5209127 
End bp5209918 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637886515 
Producthypothetical protein 
Protein accessionYP_488205 
Protein GI86751709 
COG category 
COG ID 
TIGRFAM ID[TIGR02186] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.51666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGC GTCGCTTATC GGCCTTCGCA TTCACCGTCG CAGCTGCGTT CGGGCTCGCC 
TGCGCCTGGC CGGCGCAGGC CGAGAAACTG ATCGTCTCCG TCTCCAACGC CCGGGTCACC
GTGACGCCGA ATTATTCCGG CGGCGAGCTG GTGCTGTTCG GTTCGGTCGA GCGCGACTCT
CCGGCGCCGG TCGCGCAGAT GCCCTACGAC CTCGTGGTCA CCGTGATCGG CCCGCGCACG
AACATGGTGA CGCGGCGCAA GGAACGGAAA TTCGGGATCT GGATCAACAG CGATTCGCGC
GAATTCCTGA TGGTGCCGAG CTATCTGGCG GTGTTTTCCA ACCGCCCGAT CGAGGCCATC
GCCGCGCCCG ACGTGCGGCG GCGGCAACAA CTCGGCATCA GACACACGCT GCTGACGCAG
CGGATCGGCA CCGACTATGC CGACGTCGTC GCCGACGATC AGTTTCGCAC CGCCTTCGTC
CGGCTCCGCG AGGAACGCAA GCTGTACGAG CAGGACCCCG CGGCGGTGAA GTTCCTCACG
CCGACGCTGT TCCGCACCGG CATTCCATTG CCGGCCGAAG TGCCGATCGG CAGCTACGAA
GTGCACATCA AGCTGCTCGG CAATGGCGAA TTGCTGACCC AGACCGAGAC CTCCTTCGAG
ATCGCCAAGG TCGGCTTCGA ACAATTCGTC GCCACCGCGG CGAAGCAGCA CGGCATCATC
TACGGCCTGG TGACCGCCCT GATGGCGCTC GCGACCGGAT GGATGGCGTC GATCGTCTTT
CGTCGCGACT GA
 
Protein sequence
MARRRLSAFA FTVAAAFGLA CAWPAQAEKL IVSVSNARVT VTPNYSGGEL VLFGSVERDS 
PAPVAQMPYD LVVTVIGPRT NMVTRRKERK FGIWINSDSR EFLMVPSYLA VFSNRPIEAI
AAPDVRRRQQ LGIRHTLLTQ RIGTDYADVV ADDQFRTAFV RLREERKLYE QDPAAVKFLT
PTLFRTGIPL PAEVPIGSYE VHIKLLGNGE LLTQTETSFE IAKVGFEQFV ATAAKQHGII
YGLVTALMAL ATGWMASIVF RRD