Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4608 |
Symbol | |
ID | 3912425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5203951 |
End bp | 5204499 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637886512 |
Product | TetR family transcriptional regulator |
Protein accession | YP_488202 |
Protein GI | 86751706 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.582977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCAG ATACCAAGGA CCGGCTGACA CGTTCGGACT GGCTCGCGCA CGGGCTGCGG ACGCTGGCCA GGCACGGGGC GAATGCCCTC AAGGTCGGCG ATCTCGCGGC CGGGCTGGAG GTGTCGCGGG GCAGTTTCTA CTGGCACTTC AGGGACGCCA CCGATTTCCG CCTGCAACTC CTGCAGCTCT GGCAGGAGCG AGCGACCGAC CAGGTGTTTC GCGACATCGA CGCCGCCATC GTCGGGCCGG CGCGGCTGAC GCATCTGATG AAGCTCGCCT TCAACGAGGA CCGAAGCCTC GACCGGGCGA TCCGCGAGCT TGCGGCGACC GATCCCACTG CGGCGGCGAT GGTCGCCTCG GTGGATGCCC GGCGCATCGA CTATCTGTCG AAGCTCATGA TCGAGTCGGG CGTCGAAGGC CGGCGCGCGC TACCGCGGGC CGAATTTCTG TACTGGGCCT ATATCGGTCA GACCGCGGTG CTGAACCCGG CCCACACCGT CGTGACGGAA TCGGATATCG ACGATTTGAG CGCCCTGTTC ACCCGATAG
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Protein sequence | MDSDTKDRLT RSDWLAHGLR TLARHGANAL KVGDLAAGLE VSRGSFYWHF RDATDFRLQL LQLWQERATD QVFRDIDAAI VGPARLTHLM KLAFNEDRSL DRAIRELAAT DPTAAAMVAS VDARRIDYLS KLMIESGVEG RRALPRAEFL YWAYIGQTAV LNPAHTVVTE SDIDDLSALF TR
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