| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4604 |
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| Symbol | |
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| ID | 3912421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5197662 |
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| End bp | 5199878 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637886508 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_488198 |
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| Protein GI | 86751702 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCA AGATCTTCAA GCTCGAAACC GACGCCGACG GCATTGCGCT GGTGACCTGG
GACCTGCCCG GCAAGTCGAT GAACGTGCTG GACGCCGCGA CCATCGAGGA ACTCGGCGCG
ATCGTCGAGC AGACCACCAA GGACGCCGCG GTCAAGGGCG TGGTGATCAC CTCCGCCAAG
GAGGCGTTCT GCGCCGGCGC CGACCTGTCG ATGCTGGAAA CCATGAACCG GCAGTTCGCC
CAGATCCGCA AGGACAAGGG CGAGGAGGCC GCGCAGCAGA TGCTGTTCGA CGAGAGCCGC
AAGCTGTCGC AGATCCTGCG CAGCATCGAG ACCAGCGGCA AGCCGTGGGT CGCGGCGATC
AACGGCCTCG CGCTCGGCGG CGGCTTCGAA GTGACGCTGG CCTGCCACTA TCGCGTCGCC
GCCGACAATC CGAAGTCGCG GCTCGGCCTG CCCGAGATCA AGGTCGGCCT GTTCCCCGGC
GGCGGCGGCA CCCAGCGGAT TCCGCGTATC GTCTCGCCGC AGGACGCGAT GACGATCCTG
CTCAAGGGCG ACCAGATCAA GCTCGACAAG GCCAAGGCCT GGAAGCTGGT CGACGCCGTG
GTGCCGGCCG CGGATTTGAT CCAGACCGCG AAGGACTGGA TCAAGGGCGG CGGCAAGGCT
GTGGCGCCGT GGGACGAGAA GGGCTTCAAG CTGCCCGGCG GTCCGGTGTT CTCCAAGCAG
GGCATGATGA TGTTCCCGGC CGGCAACGCG ATCTATCGCC GCGAGACCTA CGACAACTAC
CCGGCCGCGC GCGCGATCAT GAGCTGCGTC TACGAGGGCC TGCTGGTGCC GATGGATACG
GCGCTGCGGA TCGAGTCGCG CTACTTCGCC AAGGTGCTGC AGACCAAGGA AGCCGCGGCG
ATGATCCGCA GCCTGTTCTT GTCGATGCAG GAGCTGAACA AGGGCGCGCG CCGCCCGCAG
GGCGTGCCGC CGACCAAGGT CAAGAAGCTG GCCATCATCG GCGCCGGCTT CATGGGCGCC
AGCGTAGGCT ACGTCTCGGC CAAGGCCGGC ATCGACGTGG TGCTGATCGA TCGCGATCAG
GAGAGCGCCG ACAAGGGCAA GGCGCACTGC AAGAGCGTGA TCGACGGCCT GATTGCCAAG
GGCCGCGCCA AGCCGGCCGA CGCCGAAGCG CTGATGTCGC GCATCACGGC CACGCCGGAC
TACAACGCGA TCTCGGATTG CGACCTGGTG ATCGAGGCGG TGTTCGAGGA TCGTAAGATC
AAGGCCGAGA CCTACGCCAA GGCGCAACCG CTCTTGAAGG AAGGCGCGAT CTTCGCCTCC
AACACCTCGA CGCTGCCGAT CAATTCGCTG GCCGAGGAGT TCAAGGACCA GTCGAAATTC
GTCGGCATCC ACTTCTTCTC GCCGGTCGAG AAGATGATGC TGGTCGAAAT CATCGTCGGC
AAGAACACCG GCGACGTCGC GCTCGCGACC GCGCTCGACT ACACCCGTCA GATCAACAAG
ACCCCGATCG TGGTCAACGA TTCGCGCGGC TTCTTCGCCA ACCGCTGCGT GCTGCGCTTC
ACCGCCGAAG GCCTCGAGAT GCTGATGGAA GGCATCCCGG CGCCGATGAT CGAGACCGCG
GCGAAGATGG CCGGCATGCC GGTCGGGCCG CTGTCGCTCG CCGACGAGGT CGCGCTCGAT
CTGGTGCTGA AGATCATGAA GGCCACCGAG GCCGATCTCG GCGAACAGGC GGTCGATCAG
CAGCAGAAGA AGCTGATGGT CGAGATGGTG GAGAAGCAGG GCCGGTTCGG CCGCAAGAAC
GCCAAGGGCT TCTACGACTA TCCGGAGAAG GGCAAGGGCC AGAAGGCGCT GTGGGCCGGC
ATCGGCGCAC TGCAGCCCAA GCACGTCGAT CCGGATACGG TCGACGTCGA GGAACTGAAG
CAGCGCTTCT TGGTGGTGCA GGCGGTCGAA GCCGCGCGCA CCGTCGAGGA TCACGTCATC
ACCGATCCGC GCGAGGCCGA TGTCGGCTCC ATCCTCGGAT TCGGCTTCGC GCCGTTCACC
GGCGGCACGC TGAGCTACAT CGACTTCATG GGCACCAAGG AGTTCGTGGC ACTGTGCCAC
AAGCTCGAGG GCAAATACGG CTCGCGCTTC ACGCCGCCGA AGCTGCTCGA AGACATGGCC
AAGACCGGCG AAACCTTCTA CCAGCGCTTC GCCCCGAAGA AGCAGGCCGC GGCGTAA
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| Protein sequence | MTFKIFKLET DADGIALVTW DLPGKSMNVL DAATIEELGA IVEQTTKDAA VKGVVITSAK
EAFCAGADLS MLETMNRQFA QIRKDKGEEA AQQMLFDESR KLSQILRSIE TSGKPWVAAI
NGLALGGGFE VTLACHYRVA ADNPKSRLGL PEIKVGLFPG GGGTQRIPRI VSPQDAMTIL
LKGDQIKLDK AKAWKLVDAV VPAADLIQTA KDWIKGGGKA VAPWDEKGFK LPGGPVFSKQ
GMMMFPAGNA IYRRETYDNY PAARAIMSCV YEGLLVPMDT ALRIESRYFA KVLQTKEAAA
MIRSLFLSMQ ELNKGARRPQ GVPPTKVKKL AIIGAGFMGA SVGYVSAKAG IDVVLIDRDQ
ESADKGKAHC KSVIDGLIAK GRAKPADAEA LMSRITATPD YNAISDCDLV IEAVFEDRKI
KAETYAKAQP LLKEGAIFAS NTSTLPINSL AEEFKDQSKF VGIHFFSPVE KMMLVEIIVG
KNTGDVALAT ALDYTRQINK TPIVVNDSRG FFANRCVLRF TAEGLEMLME GIPAPMIETA
AKMAGMPVGP LSLADEVALD LVLKIMKATE ADLGEQAVDQ QQKKLMVEMV EKQGRFGRKN
AKGFYDYPEK GKGQKALWAG IGALQPKHVD PDTVDVEELK QRFLVVQAVE AARTVEDHVI
TDPREADVGS ILGFGFAPFT GGTLSYIDFM GTKEFVALCH KLEGKYGSRF TPPKLLEDMA
KTGETFYQRF APKKQAAA
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