| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4597 |
|---|
| Symbol | |
|---|
| ID | 3912414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 5191304 |
|---|
| End bp | 5192674 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637886501 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_488191 |
|---|
| Protein GI | 86751695 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3572] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01436] glutamate--cysteine ligase, plant type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.4332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTG ACCAGATCGA TATGACGCCG CTGAACTCGC GCGACGAACT GGTCGCGTGG
ATCGAAGCGG GCGTCAAACC GCCGTCGGAA TTCCGCATCG GCACCGAACA CGAGAAGACG
CCGTTCACGC TCGAGGGCCA TCACCCGGTA CCTTACGACG GCGCGCGCGG CATCGGCGCG
CTGCTCGAGG GCATGAAGAT CCTGCTCGGC TGGGAACCGA TCATGGAAGG CCCGCACATC
ATCGGGCTGC ACGACGTCAC CGGCGGCGGC GCGATTTCGC TCGAGCCCGG CGGACAGTTC
GAATTGTCCG GCGCGCCGGT CGACAATGTG CACCAGACCC ATTCCGAGCT GATGGCGCAT
CTGGCGCAGG TGCGCGAGAT CGCAGCCCCG CTCGGCATCG GCTTCCTCGG CCTCGGCATG
ACGCCGTCGT GGTCGCGCGA CGACATTCCG GTGATGCCGA AGGGCCGCTA CAAGATCATG
ACCAACTACA TGCCGAAGGT CGGCCGCTAC GGCCTCGACA TGATGTATCG GACCTGCACG
GTGCAGACCA ATTTGGACTT CTCGTCCGAA GCCGACATGG TCAAGAAGCT GCGGGTTTCG
GTGGCGCTGC AGCCGGTCGC GACCGCTCTG TTCGCCAACT CGCCGTTCAC CGAAGGCAAG
CCGAACGGCT TCTTGTCGTT CCGTTCCGAA ATCTGGCGCG ACACCGACAA CGCCCGCTCC
GGCATGATCC CGTGGGCGTT CGAGGACGGC ATGGGGTTCG AGCGCTGGGT CGACTACGCG
CTCGACGTGC CGATGTATTT CGTCAAGCGC GGCGATGATT ACATCGACGT CTCCGGCTCG
TCGTTCCGCG ATTTCTTCGA CGGCCGAAAC GACAAGATGC CGGGCGAGCG ACCGACGCTG
TCGGACTGGG CCAACCATCT GTCGACGATC TTCCCCGAAG TGCGGCTGAA GCGTTACCTC
GAAATGCGTG GCGCCGACGG CGTGCCGTGG GGCCGGCTGC CGGCGTTGCC GGCGTTCTGG
GTCGGCCTCT TGTACGACGA CCAGAGCCTC GACGCCGCCT GGGAGATCGT CAAAGGCTGG
GACGCCTGGG AGCGGCAGGC GCTGCGCGAC GACGTCCCCC GGCTCGGCTT CAAGGCCAAG
ATCCGCAACC GATTTCTGTT CGAGATCGCC AAGGAATGCC TGGTGCTGGC CCATGCGGGC
CTGAGGCGCC GCGGCCGGAT CGATTCGTTC GGCAACGACG AATCGCGGTA TCTCGCGCCG
CTCGAGGACA TCCTCGCCTC CGGCCGCACC CCGGCCGAAG AGATGCTGGA GAAATTCAAC
GGCGCCTGGC AGGGCTCGGT GGAGCCGGCC TACGACGAAT ACGCGTTCTG A
|
|---|
| Protein sequence | MARDQIDMTP LNSRDELVAW IEAGVKPPSE FRIGTEHEKT PFTLEGHHPV PYDGARGIGA
LLEGMKILLG WEPIMEGPHI IGLHDVTGGG AISLEPGGQF ELSGAPVDNV HQTHSELMAH
LAQVREIAAP LGIGFLGLGM TPSWSRDDIP VMPKGRYKIM TNYMPKVGRY GLDMMYRTCT
VQTNLDFSSE ADMVKKLRVS VALQPVATAL FANSPFTEGK PNGFLSFRSE IWRDTDNARS
GMIPWAFEDG MGFERWVDYA LDVPMYFVKR GDDYIDVSGS SFRDFFDGRN DKMPGERPTL
SDWANHLSTI FPEVRLKRYL EMRGADGVPW GRLPALPAFW VGLLYDDQSL DAAWEIVKGW
DAWERQALRD DVPRLGFKAK IRNRFLFEIA KECLVLAHAG LRRRGRIDSF GNDESRYLAP
LEDILASGRT PAEEMLEKFN GAWQGSVEPA YDEYAF
|
|---|
| |