Gene RPB_4593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4593 
Symbol 
ID3912410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5187438 
End bp5188208 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID637886497 
Productpeptidase S26A, signal peptidase I 
Protein accessionYP_488187 
Protein GI86751691 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.814895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA AGGCAGGCAT GGTCGCCGGG ACGGTGCGGC GCTGGGGCGC CCAACTCGGG 
CAATTGGCGG CGGTGGTGGC GATCGTGCTG GCCGGCAAGG CCGCGCTGGC AGAGCCGTTC
TACGTGCCGT CCGGCTCGAT GGAGCCGACG CTGCTGATCG GCGACGCGCT GCTCGCCTCG
AAATTTCCTT ACGGCTACTC GACCGCGTCG CTGCCGATCC ACGTGGCGTT TCCCGAGACC
GGCCGGGTGT TCGGCGCCAC GCCGCATCGC GGCGACGTCG TGGTGTTTCG CTGGCCCGGC
GACCGCTCGC AGGTCTGGGT CAAGCGCGTG ATCGGCCTGC CCGGCGACCG GATCGAACTG
ACCGGCGGCG TGGTCAGCAT CAACGGCGTC GCCGCCACGG TGAAAGCCGA CGGCGTCGGC
CGCGCCGAGG ACGAAGACGG CGCTTACGAG ACCGCCGCGA AATATATCGA GACCCTGCCC
GACGGCGTCT CGCATCCGAT CTTCAAGCTG TACGACCATG GCCGGCTCAA CAACACGCCG
GAGATCATTG TGCCGCCTGG ACATCTGTTC GTGATGGGCG ACAACCGCGA CAATTCATCG
GACAGCCGCG TGCCGGTGCG CCAGGGCGGC GTCGGGCTGT TGCCGATGGA CAATCTGGTC
GGCCGCGTCG ACGCCATCGT CGGCTCGTGG AATCCCGGCG TGCGCAAGGA GCCCGTCACC
AACTGGCTGT CCGGCTTCCG CATCGCCCGG TTCTTCACCG CGGTGCATTG A
 
Protein sequence
MNGKAGMVAG TVRRWGAQLG QLAAVVAIVL AGKAALAEPF YVPSGSMEPT LLIGDALLAS 
KFPYGYSTAS LPIHVAFPET GRVFGATPHR GDVVVFRWPG DRSQVWVKRV IGLPGDRIEL
TGGVVSINGV AATVKADGVG RAEDEDGAYE TAAKYIETLP DGVSHPIFKL YDHGRLNNTP
EIIVPPGHLF VMGDNRDNSS DSRVPVRQGG VGLLPMDNLV GRVDAIVGSW NPGVRKEPVT
NWLSGFRIAR FFTAVH