| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4592 |
|---|
| Symbol | |
|---|
| ID | 3912409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 5186014 |
|---|
| End bp | 5187441 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637886496 |
|---|
| Product | peptidase U62, modulator of DNA gyrase |
|---|
| Protein accession | YP_488186 |
|---|
| Protein GI | 86751690 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.647978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC TCGCCCAGAC CTCCCTGCTC GACCGCGCCA ATCTCGATCG TGACGACGTC
CGCCGCGAGA TCGCGCGGGG GCTGCAGGGG GCCGATGATG GCGAGCTGTT TCTCGAATAC
AGCCAGACCG AGGCGCTGGC GTTCGACAAT GGCCGGCTGA AGCAGGCGAC CTACGACACC
GCGCAGGGGT TTGGTTTACG CGCCGTTAAG GACGACGCGG TCGGCTACGC GCATTCCTCC
GACGTGTCGC TGCCGGCGCT GATCCGCGCC GCGGACGCGG TGGCGGCGGT GCGCGGCGAC
TACAGCGGCG TGCTTTCGGC GGCGCCGACC CACACCAATG TCCGGCTCTA TGGCGACGAC
AATCCGCTCG ACGCGCCGGG CTTCGAGGCC AAGGTCAAGC TGCTCGCCGA GATCGACGCC
TATGTGCGCG ACAAGGATTC GCGCGTGCGG CAGGTGTCGG TGTCGGTCGG CGCGACCTGG
CAGGTGGTCG AGATCCTGCG CCCCGACGGC GAGAGCTATC GCGACATCCG CCCGCTGGTG
CGGGTCAACG TCTCGGTGGT CGCCGGCCAG GGTGACCGGC AGGAGAGCGG CTCCAAGGGT
TATGGCGGCC GCGAGCCCTA TGCGCGCTTC ATCGAGACCA AGGCCTGGCG CGAGGCCGCC
GACGGCGCGC TGCGCGAGGC GATGGTCAAT CTGGAATCGG TGCCGGCGCC GGCCGGCGAA
ATGGAGGTGG TGCTCGGCCC CGGCTGGCCG GGCGTGATGC TGCACGAGGC GGTCGGCCAC
GGCCTCGAAG GCGATTTCAA CCGCAAGAAG ACGTCGGCCT TTGCCGGCCT GCTCGGCCAG
CAGGTCGCCG CCAAGGGCGT CACCGTGGTC GACGACGGCA CCATCTCGGC GCGGCGCGGC
TCGCTGTCGA TCGACGACGA GGGCACGCCG ACCAGCCGCA CCGTGCTGAT CGAGGACGGC
ATCCTCACCG GCTACATGCA GGACCGCCAG AACGCCCGGC TGATGGGCAT GAAGCCGACC
GGCAACGGCC GCCGGCAGAG CTACGCCCAC GTGCCGATGC CGCGGATGAC CAACACCTAC
ATGCTGGCCG GTGGCCACGA TCCGGCCGAG ATCCTCGCCT CTGTGAAGAA CGGCATCTAT
GCGGTGAATT TCGGCGGCGG TCAGGTCGAC ATCACCTCCG GAAAATACGT GTTCCAGTGC
ACCGAGGCCT ACAAGATCGA AAACGGCAAG GTCGGCGCGC CGCTCAAGGG CGCGATGCTG
ATCGGCAACG GACCGACTGA TTTGCACCGC ATTTCCATGA TCGGAAACGA CCTGCAGCTC
GACGACGGCA TCGGCACCTG CGGCAAGAAC GGCCAGGGCG TGCCGGTGGG TGTCGGTCAA
CCGACGCTGC GGATGGATCG GATCACGGTC GGAGGCACCG GCGGATGA
|
|---|
| Protein sequence | MTSLAQTSLL DRANLDRDDV RREIARGLQG ADDGELFLEY SQTEALAFDN GRLKQATYDT
AQGFGLRAVK DDAVGYAHSS DVSLPALIRA ADAVAAVRGD YSGVLSAAPT HTNVRLYGDD
NPLDAPGFEA KVKLLAEIDA YVRDKDSRVR QVSVSVGATW QVVEILRPDG ESYRDIRPLV
RVNVSVVAGQ GDRQESGSKG YGGREPYARF IETKAWREAA DGALREAMVN LESVPAPAGE
MEVVLGPGWP GVMLHEAVGH GLEGDFNRKK TSAFAGLLGQ QVAAKGVTVV DDGTISARRG
SLSIDDEGTP TSRTVLIEDG ILTGYMQDRQ NARLMGMKPT GNGRRQSYAH VPMPRMTNTY
MLAGGHDPAE ILASVKNGIY AVNFGGGQVD ITSGKYVFQC TEAYKIENGK VGAPLKGAML
IGNGPTDLHR ISMIGNDLQL DDGIGTCGKN GQGVPVGVGQ PTLRMDRITV GGTGG
|
|---|
| |