| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4588 |
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| Symbol | |
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| ID | 3912405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5182619 |
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| End bp | 5183473 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637886492 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_488182 |
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| Protein GI | 86751686 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.780842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGT CGATGGGCCG AATTGGCCGG CATTTGCTTT GCAGTGGAAT TCTGGCAGCC
GCGCTCGGCG TCGGCGGCGC CGCTCACGCG GTCGAAGGCC AGCCCGCGCC GTGGGAGATG
CAGCTTCAGA AGGCCGCGAC CCCGGTGATG GAAAACATCG TCTGGTTCCA CAGCTTCCTG
CTCTGGCTGA TCACCGCGAT CACGCTGTTC GTGCTGGCGC TGCTGGTGAT CGTGGTGGTG
AAGTTCAACG CCAAGGCCAA CCCGGTGCCG TCGAAGACCA CGCACCACAC GCTGATCGAG
GTCGCCTGGA CCATCGTCCC GGTGCTGATC CTGGTCGCGG TCGCGGTGCC GTCGTTCCGC
CTGCTGTTCT TCCAGCTCGA TATTCCGAAG GCCGATGTCA CCATCAAGGC GACCGGCAAT
CAGTGGAACT GGACCTACAA TTATCCCGAC GACAAGATCG AGTTCACCTC GATCATGCTG
ACGGACGAAG AACGTTCGAA AATGAATCCG GTGCCGCCGC GGCTGCTCGC GGTCGACAAC
GAAACGGTCG TCCCGGTCAA CAAGGTGGTG CGGATCCAGA CCACCGCCGC CGACGTGATC
CACTCCTGGG CGATCCCGTC CTTCGGCGTC AAGATCGACG CCATTCCCGG CCGCCTCAAC
GAGACCTGGT TCAGGGCCAC CAAGGAAGGC CGTTACTACG GCCAGTGCTC GGAACTTTGC
GGCAAGGACC ACGCTTTCAT GCCCATCGTC GTCCGCGTCG TCAGCGACCA GGAATACGAC
GCCTGGAAGA AGCAGCAGCA GGTCGCCTCC CGCGGCGGCA AGTCCTACGC CTCGGTGGGC
GCCGCCGCGC AGTGA
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| Protein sequence | MTMSMGRIGR HLLCSGILAA ALGVGGAAHA VEGQPAPWEM QLQKAATPVM ENIVWFHSFL
LWLITAITLF VLALLVIVVV KFNAKANPVP SKTTHHTLIE VAWTIVPVLI LVAVAVPSFR
LLFFQLDIPK ADVTIKATGN QWNWTYNYPD DKIEFTSIML TDEERSKMNP VPPRLLAVDN
ETVVPVNKVV RIQTTAADVI HSWAIPSFGV KIDAIPGRLN ETWFRATKEG RYYGQCSELC
GKDHAFMPIV VRVVSDQEYD AWKKQQQVAS RGGKSYASVG AAAQ
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