| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4586 |
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| Symbol | |
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| ID | 3912403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5179911 |
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| End bp | 5180852 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886490 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_488180 |
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| Protein GI | 86751684 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGGTCA TAGACACCAA CCAGATCGAT CTCGTCGCGC CCCGCATTTC CGAGGCCGGC
GTCGCCGACT ACATCGCGCT GCTCAAGCCG CGGGTGATGT CGCTGGTGGT GTTCACCGCG
CTGGTCGGCA TGCTGCTGGC GCCGGGCGAC TTTCACCCGG TGCTGGCGAT CACCGCGATG
CTGTGCATCG CGGTCGGCGG CGGCGCGGCC GGCGCACTGA ACATGTGGTA CGAGGACGAC
ATCGACGGCC AGATGACGCG CACCGCCAAC CGGCCGATCC CGCGCGGCCG CGTCACCCGG
CCGGAAGCGC TGACCTTCGG CATCACGCTG TCGTTCTTCT CGGTGATGAC GCTCGGCATC
CTGGTCAACT GGGTCGCCGG CGCGTTGCTC GCCTTCACCA TCTTCTTCTA CGTGGTGATC
TATACGATGT GGCTGAAGCG CTCGACCGCG CAGAACATCG TGATCGGCGG CGCCGCCGGC
GCGCTGCCGC CGGTGGTGGC GTGGGCCGCG GTCACCGGCT CGCTGGCGGT GGAGCCGCTG
CTGTTGTTCG CCATCATCTT CTTCTGGACG CCGCCGCATT TCTGGGCGCT GGCGCTGTTC
CGCAATGACG ACTACGCCCG CGCCGGCGTG CCGATGCTGC CGGTGGTCGC CGGTCAGGAT
CACACAAGGC TGCAGATCCT GCTCTACACC ATCGTGCTGG TCGCGGTCGC GGCGGCGCCC
TGGCCGCTCG GCTATTTCAG CGCGATCTAC GGCGTGGCGT CGCTGGCGCT CGGCGGCTGG
ATGCTGGTGC TCGCGCTGCG GGTCTATCGC CATCGCACCG GCAGCGCCGC GCTGCGGGCG
ACGCGCAATC TGTTCAAGTT CTCGATCCTG TATCTGTTCG CGCTGTTCTC GATCCTGTTG
CTCGAGGTGG TGGCGAAGGC GGTGTGGCGA TTGTTCGCCT GA
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| Protein sequence | MSVIDTNQID LVAPRISEAG VADYIALLKP RVMSLVVFTA LVGMLLAPGD FHPVLAITAM
LCIAVGGGAA GALNMWYEDD IDGQMTRTAN RPIPRGRVTR PEALTFGITL SFFSVMTLGI
LVNWVAGALL AFTIFFYVVI YTMWLKRSTA QNIVIGGAAG ALPPVVAWAA VTGSLAVEPL
LLFAIIFFWT PPHFWALALF RNDDYARAGV PMLPVVAGQD HTRLQILLYT IVLVAVAAAP
WPLGYFSAIY GVASLALGGW MLVLALRVYR HRTGSAALRA TRNLFKFSIL YLFALFSILL
LEVVAKAVWR LFA
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