Gene RPB_4581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4581 
Symbol 
ID3912398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5176792 
End bp5177571 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content73% 
IMG OID637886485 
Productsurfeit protein 
Protein accessionYP_488175 
Protein GI86751679 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGT CGCCTGCGCG CCGGCGCGGC ATCGCCGGGA TGAGCCTGAT CGCGCTGTCG 
ATCGTCGCGG TGCTGCTGTC GCTCGGGGTC TGGCAATTGC AGCGCCGCAC CGCGAAGCAT
GCGCTGATCG CGGCGCTGAC CGAGCGGCTC GCGCAAGCCC CGGTGGCACT GCCGCCGGTG
GCGCAATGGC CGTCGCTGAC GCCCGCCGCC GACGAATTCC GCCGCGTCGG CTTCACCGCG
ACCTACGCGC AGCAACCGGA CGCGATGGTG TATTCGTCGG GCTCGGCGGT GCGCGGCGAT
ATTTCCGGGC CGGGCACCTG GGCGTTCCTG CCGGCGCGGC TGCCCGGCGG CGAGACCGTC
GTCGTCAATG CCGGCTTCGT CCCGAATACG ATGCAGGACC GCGCTTACGA GGACCGCGTG
GTGACGCCGC TGGTCACCGG GCAGCCGGTG ACGCTCACCG GCTATCTGCG GTTCCCGGAG
GGCGCCGGGG CGCTGACGCC CGATCCGGAC GCCGCGAAGC GGCTGTGGTT CACCCGCGAC
GTGGCGGCGA TGGCGGAGCG GCTCGGCTGG GCGGCGGACG CCGGCCTCGC GCCGTTCTAT
ATCGACCTGG AGAAACCGGT GCCGCCGAAC GGCCTGCCCA AGCCCGGCCC GCTCGGCGTC
CATCTGCGCG ACCAGCACAT GCAATATGCG ATCACCTGGT TCGGCCTGGC GTTGGCGGTG
ACGGTGGCGT TCGGGGTCTG GCTGTGGGGG CAGCGGCGCG CCGCCGCTGC TGTCGGTTGA
 
Protein sequence
MTASPARRRG IAGMSLIALS IVAVLLSLGV WQLQRRTAKH ALIAALTERL AQAPVALPPV 
AQWPSLTPAA DEFRRVGFTA TYAQQPDAMV YSSGSAVRGD ISGPGTWAFL PARLPGGETV
VVNAGFVPNT MQDRAYEDRV VTPLVTGQPV TLTGYLRFPE GAGALTPDPD AAKRLWFTRD
VAAMAERLGW AADAGLAPFY IDLEKPVPPN GLPKPGPLGV HLRDQHMQYA ITWFGLALAV
TVAFGVWLWG QRRAAAAVG