Gene RPB_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4580 
Symbol 
ID3912397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5176468 
End bp5176698 
Gene Length231 bp 
Protein Length76 aa 
Translation table11 
GC content66% 
IMG OID637886484 
Producthypothetical protein 
Protein accessionYP_488174 
Protein GI86751678 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.520083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA GCTACAGCTA TTCCGTCATT CTCGAGCCCC AGGAGGGCGG CGGTTTCACC 
GTGCTCGTCC CGGCGCTGCC CGAGGTCGTG ACCGAGGGCG ACACCGAGCA GGAAGCGCTG
GCCAATGTCG AGGAGGCGAT CCGTGCCATT CTCGCCTATC GGCGGGAAAA CGGCATGGCG
CCTCCGTCCG ATGCTCATCC CGAAATTCGC CACGTGACGG TGGCCGCCTG A
 
Protein sequence
MAVSYSYSVI LEPQEGGGFT VLVPALPEVV TEGDTEQEAL ANVEEAIRAI LAYRRENGMA 
PPSDAHPEIR HVTVAA