Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4577 |
Symbol | |
ID | 3912394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5173307 |
End bp | 5174596 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637886481 |
Product | peptidase M16-like |
Protein accession | YP_488171 |
Protein GI | 86751675 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG AAGTCAGCAA GCTTCCCTCG GGCCTGACCG TCGTCACCGA CACCATGCCG CATCTCGAGA CCGCGGCGCT GGGCGTCTGG ACCGGCGTCG GCGGCCGCGA CGAGAAGCCC GACGAGCATG GCATCTCGCA TCTGCTGGAG CACATGGCGT TCAAGGGCAC CACCAAGCGG TCGTCGCGCG ACATCGCCGA GGAGATCGAG GCGGTCGGCG GCGACCTCAA TGCCGGCACC TCGACCGAGA CCACCGCCTA TTATGCGCGG GTGATGAAGG CCGACGTGCC GCTGGCGCTC GACGTGCTGA GCGACATTCT CGCCAACCCG GTGTTCGAGG CCGAGGAGCT CGAACGCGAG AAGAGCGTGA TCGTGCAGGA GATCGGCGCG GCGCAGGACA TGCCGGACGA CGTCGTGTTC GAATATCTCA ACGAGCTGTG CTATCCGGAG CAGCCGATCG GCCGCTCGCT GCTCGGCACC GCCAAGACGC TGAAGGGCTT CAACCGCGAC AAGCTGCAGT CCTATCTGGC GACCCATTAC CGCGGCCCCG ACATGGTGGT GGCCGCCGCC GGCGCGGTCG ACCACAAGCG TGTCGTCGAG GAGGTCTCGC ACCGCTTCGC GAGCTTCGAC GCCACCCCGG CGCCGAAGCC GCAGCCGGCG ATGTTCGGCG CCGGTGGCTC GCGCGTAGTG CATCGCGACC TCGAACAGGC GCATCTGACG CTGGCGCTGG AAGGCCTGCC GCAGAGCGAC AAGTCGCTGT TCAGCCTGCA GGTGTTCACC AACATCCTCG GTGGCGGGAT GTCGTCGCGG CTGTTCCAGG AGGTGCGCGA GAAGCGCGGG CTGTGCTACT CGATCTACAC CTTCCACGCG CCCTATGCGG ACACCGGCTT CTTCGGCCTC TACACCGGCA CCGATCCGGA CGACGCGCCG GAAATGATGG AAGTGATCGT CGACGTCATC AACGACGCGG TCGAGACGCT CACCGATGCG GAGATCGCCC GCGCCAAGGC GCAGATGAAG GCCGGGCTGC TGATGGCGCT GGAAAGCTGC TCGTCGCGCG CCGAGCAGCT CGCCCGGCAC GTCCTGGCCT ATGGCCGGCC GCTGTCGGTC GACGAACTGG TCGGCAAGAT CGATGCGGTC AGCATCGAGA CGACGCGGCA GGCCGCTCGC GATTTGCTGA CGCGCAGCCG CCCCGCCGTC GTGGCGCTCG GCAGCGGCCG GGGTCTGGAC ACGGCGGTGG GTTTTGCGGA AGGATTGACC CAGTCCAAGG CCAAAACCTC GTATCATTGA
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Protein sequence | MSVEVSKLPS GLTVVTDTMP HLETAALGVW TGVGGRDEKP DEHGISHLLE HMAFKGTTKR SSRDIAEEIE AVGGDLNAGT STETTAYYAR VMKADVPLAL DVLSDILANP VFEAEELERE KSVIVQEIGA AQDMPDDVVF EYLNELCYPE QPIGRSLLGT AKTLKGFNRD KLQSYLATHY RGPDMVVAAA GAVDHKRVVE EVSHRFASFD ATPAPKPQPA MFGAGGSRVV HRDLEQAHLT LALEGLPQSD KSLFSLQVFT NILGGGMSSR LFQEVREKRG LCYSIYTFHA PYADTGFFGL YTGTDPDDAP EMMEVIVDVI NDAVETLTDA EIARAKAQMK AGLLMALESC SSRAEQLARH VLAYGRPLSV DELVGKIDAV SIETTRQAAR DLLTRSRPAV VALGSGRGLD TAVGFAEGLT QSKAKTSYH
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