Gene RPB_4577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4577 
Symbol 
ID3912394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5173307 
End bp5174596 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content67% 
IMG OID637886481 
Productpeptidase M16-like 
Protein accessionYP_488171 
Protein GI86751675 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG AAGTCAGCAA GCTTCCCTCG GGCCTGACCG TCGTCACCGA CACCATGCCG 
CATCTCGAGA CCGCGGCGCT GGGCGTCTGG ACCGGCGTCG GCGGCCGCGA CGAGAAGCCC
GACGAGCATG GCATCTCGCA TCTGCTGGAG CACATGGCGT TCAAGGGCAC CACCAAGCGG
TCGTCGCGCG ACATCGCCGA GGAGATCGAG GCGGTCGGCG GCGACCTCAA TGCCGGCACC
TCGACCGAGA CCACCGCCTA TTATGCGCGG GTGATGAAGG CCGACGTGCC GCTGGCGCTC
GACGTGCTGA GCGACATTCT CGCCAACCCG GTGTTCGAGG CCGAGGAGCT CGAACGCGAG
AAGAGCGTGA TCGTGCAGGA GATCGGCGCG GCGCAGGACA TGCCGGACGA CGTCGTGTTC
GAATATCTCA ACGAGCTGTG CTATCCGGAG CAGCCGATCG GCCGCTCGCT GCTCGGCACC
GCCAAGACGC TGAAGGGCTT CAACCGCGAC AAGCTGCAGT CCTATCTGGC GACCCATTAC
CGCGGCCCCG ACATGGTGGT GGCCGCCGCC GGCGCGGTCG ACCACAAGCG TGTCGTCGAG
GAGGTCTCGC ACCGCTTCGC GAGCTTCGAC GCCACCCCGG CGCCGAAGCC GCAGCCGGCG
ATGTTCGGCG CCGGTGGCTC GCGCGTAGTG CATCGCGACC TCGAACAGGC GCATCTGACG
CTGGCGCTGG AAGGCCTGCC GCAGAGCGAC AAGTCGCTGT TCAGCCTGCA GGTGTTCACC
AACATCCTCG GTGGCGGGAT GTCGTCGCGG CTGTTCCAGG AGGTGCGCGA GAAGCGCGGG
CTGTGCTACT CGATCTACAC CTTCCACGCG CCCTATGCGG ACACCGGCTT CTTCGGCCTC
TACACCGGCA CCGATCCGGA CGACGCGCCG GAAATGATGG AAGTGATCGT CGACGTCATC
AACGACGCGG TCGAGACGCT CACCGATGCG GAGATCGCCC GCGCCAAGGC GCAGATGAAG
GCCGGGCTGC TGATGGCGCT GGAAAGCTGC TCGTCGCGCG CCGAGCAGCT CGCCCGGCAC
GTCCTGGCCT ATGGCCGGCC GCTGTCGGTC GACGAACTGG TCGGCAAGAT CGATGCGGTC
AGCATCGAGA CGACGCGGCA GGCCGCTCGC GATTTGCTGA CGCGCAGCCG CCCCGCCGTC
GTGGCGCTCG GCAGCGGCCG GGGTCTGGAC ACGGCGGTGG GTTTTGCGGA AGGATTGACC
CAGTCCAAGG CCAAAACCTC GTATCATTGA
 
Protein sequence
MSVEVSKLPS GLTVVTDTMP HLETAALGVW TGVGGRDEKP DEHGISHLLE HMAFKGTTKR 
SSRDIAEEIE AVGGDLNAGT STETTAYYAR VMKADVPLAL DVLSDILANP VFEAEELERE
KSVIVQEIGA AQDMPDDVVF EYLNELCYPE QPIGRSLLGT AKTLKGFNRD KLQSYLATHY
RGPDMVVAAA GAVDHKRVVE EVSHRFASFD ATPAPKPQPA MFGAGGSRVV HRDLEQAHLT
LALEGLPQSD KSLFSLQVFT NILGGGMSSR LFQEVREKRG LCYSIYTFHA PYADTGFFGL
YTGTDPDDAP EMMEVIVDVI NDAVETLTDA EIARAKAQMK AGLLMALESC SSRAEQLARH
VLAYGRPLSV DELVGKIDAV SIETTRQAAR DLLTRSRPAV VALGSGRGLD TAVGFAEGLT
QSKAKTSYH