| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4566 |
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| Symbol | |
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| ID | 3912383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5165032 |
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| End bp | 5166696 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637886470 |
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| Product | general substrate transporter |
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| Protein accession | YP_488160 |
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| Protein GI | 86751664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGTT ATGCCGCAAC GCAGCGGCGG TCCGGCGGAA TGACCAAGGA CGAACGTTTC
GTCATTGTCG CATCCTCGCT CGGCACCGTT TTCGAATGGT ACGATTTCTA TCTGTACGGG
TCGCTCGCCG CGATCATCGG CGCGCAGTTC TTCAGCGCCT ACCCGCCCGC CACACGCGAC
ATTTTCGCCC TTCTGGCGTT CGCCGCCGGC TTCCTGGTGC GCCCGTTCGG CGCCATCGTG
TTCGGCCGCA TCGGCGACAT CGTCGGCCGC AAATACACCT TCCTCGTCAC CATTCTGATC
ATGGGCCTGT CGACCTTCAT CGTCGGCCTG CTGCCCAATG CGGCGACCAT CGGCATTGCG
GCGCCGATCA TCCTGATCTG TCTGCGTCTG CTGCAGGGCC TCGCGCTCGG CGGCGAATAT
GGCGGCGCGG CGACCTATGT GGCCGAGCAT GCTCCACCCG GCAAACGCGG CTACTACACG
TCGTTCATCC AGACCACCGC CACGCTCGGC CTGTTCCTGT CGCTGATCGT GATCCTGGTC
ACCCGCACGG TGCTGGGCGA ACCGGAATTC GCCGCCTGGG GTTGGCGCAT TCCGTTCCTG
GTATCGGTCG CGCTGCTCGG CGTCTCGGTC TGGATCCGGC TGCGGCTGAA CGAATCGCCC
GTGTTCCAGA AGATGAAGGA AGAGGGCAAG AGTTCGAAAG CGCCTCTGAC CGAAGCCTTC
GCCAATTGGG GCAACGCCAA GATCGTGCTG ATCGCCCTGT TCGGCGGCGT GATGGGCCAG
GGCGTGGTCT GGTACACCGG CCAGTTCTAC GCGCTGTTCT TCCTGCAATC GATCCTGAAG
GTCGACGGCT ACACGTCGAA CCTGCTGATC GCCTGGTCGC TGCTGCTCGG CACCTTCTTC
TTCATCTTCT TCGGCTGGCT GTCGGACAAG ATCGGCCGCA AGCCGATCAT CCTGACCGGC
TGCGCGATCG CCGCGCTGTC GTTCTTCCCG ATCTTCAAGG CGATCACGAC CAACGCCAAC
CCGGCGCTGG AGCGGGCCAT CGAGACCGTC AAGGTCGAGG TGGTGTCGGA TCCCGCGCTG
TGCGGCGACC TGTTCAACCC GGTCGGCACC CGCGTGTTCA CCGCGCCTTG CGACACTGCG
CGCGCCTACC TGTCGCAGTC GTCGGTGAAG TACTCGACCG CGAAGGGCCC GGCGGGCTCG
GGCGTCAAGG TGCTCGTGAA CGGCGCCGAG GTGCCCTACG TCGACGCCAA GACCTCCAAC
CCGGCGGTGC TGGCGGCGAT CCAGGCGGCG GGCTATCCGA AGGCCGGCAA CGCCGAGATC
ATCAAGATGG CGCATCCGTT CGACGTCTTC CAGCCGCGCA TCGCGGCGAC GATCGGGCTG
CTGTTCGTGC TGGTGCTGTT CGTCACCATG GTCTACGGGC CGATCGCCGC GATGCTGGTC
GAACTGTTCC CGACCCGCAT CCGCTACACC TCGATGTCGC TGCCCTATCA CATCGGCAAC
GGCTGGTTCG GCGGCCTGCT GCCGGCGACC GCCTTCGCCA TCGTGGCGTC GACCGGCGAT
ATCTACGCCG GCCTCTGGTA TCCGATCATC TTCGCGTCGA TCACCGTGGT GATCGGCCTG
ATCTTCCTGC CCGAGACCAA GAACGTCGAT ATCAGCAGGA ACTGA
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| Protein sequence | MSSYAATQRR SGGMTKDERF VIVASSLGTV FEWYDFYLYG SLAAIIGAQF FSAYPPATRD
IFALLAFAAG FLVRPFGAIV FGRIGDIVGR KYTFLVTILI MGLSTFIVGL LPNAATIGIA
APIILICLRL LQGLALGGEY GGAATYVAEH APPGKRGYYT SFIQTTATLG LFLSLIVILV
TRTVLGEPEF AAWGWRIPFL VSVALLGVSV WIRLRLNESP VFQKMKEEGK SSKAPLTEAF
ANWGNAKIVL IALFGGVMGQ GVVWYTGQFY ALFFLQSILK VDGYTSNLLI AWSLLLGTFF
FIFFGWLSDK IGRKPIILTG CAIAALSFFP IFKAITTNAN PALERAIETV KVEVVSDPAL
CGDLFNPVGT RVFTAPCDTA RAYLSQSSVK YSTAKGPAGS GVKVLVNGAE VPYVDAKTSN
PAVLAAIQAA GYPKAGNAEI IKMAHPFDVF QPRIAATIGL LFVLVLFVTM VYGPIAAMLV
ELFPTRIRYT SMSLPYHIGN GWFGGLLPAT AFAIVASTGD IYAGLWYPII FASITVVIGL
IFLPETKNVD ISRN
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