Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4562 |
Symbol | |
ID | 3912379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5157698 |
End bp | 5158762 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637886466 |
Product | Beta-lactamase-like |
Protein accession | YP_488156 |
Protein GI | 86751660 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.809352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATAAGA AGACCGACAC CGCCGACAAA CCCCACGACG ATCTGCGCTT TCTGCTGGAG AGCCACCCCG GACCCGACCA GGTCGTCGAC ATCGCCCCGG GCGTGCTGTG GCTGCGGCTG AAGCTGCCGT TCCGCCTCAA CCACGTGAAC ATCTATCTGC TCGCCGATGG CGACGGCTGG GCGATGGTCG ACACCGGCTT CGGCAACGAC ACCACGATCG CGGCCTGGGA AACGCTGTTC GACGGCGCGC TCAAAGGCTT CGCCATCAGC CGCGTGATCG TGACCCACGC CCACCCCGAC CATTTCGGCC AGGCCGGCTG GATCGTGCAG CGGTTCCGCT GCCCGTTCTA CATGTCGCAG ATCGAATATC TGCAGGGCGT CTATCATCAG AACCGCCGCA GCGAGGAGCG GCTCGTCAAT TCGCGCGAGT TCTTCCACCG CCACGGCATG GACGACTCCA TCACCGCGCA ATTGCTCGGC CGCGGTCAGG ACTATCTGAA GCGCGCGGTG CCGCTTCCGG CGGCGTATCG ACGACTCACC AAGGGCGACC ACATCCGGAT CGGCACACGG ACGTTTCGCA TCATCACCGG CGCCGGCCAC TCGCCCGATC AGGTGATGCT GTATTGCGCC GCCGACAAGC TGTTTCTCTC CGCCGATCAG GTGCTGAGCA AGATCTCCCC CAATGTCAGC GTCTGGGCGC ACGAGCCGGA CGAAGACGCG CTCGGCTCCT ATCTGAAATC ACTCGCCGAA CTGACCACGC TGCTACCGGA CGATGTGCTG GTGCTGCCGG GTCACGGCCT GCCCTTCCAC GGCGTCAAGA CCCGTATCAA GCAGCTCGCC GATCATCACG AGGAACGCTG CGGCGTGATC GCGGAGGCCT GCCGCGACCG GGCGATGAGT TCCGCCGAGC TGGTGCCGGT GGTGTTCCAC AAGCACGTGC TGGATGCGCA CCAGACCGGC TTTGCGGCCG GCGAACTGAT CGCGCATGTC AACTACATGC TGGCGCGCAA CCGCCTGACG ATCGTCGACA AGGCCGACGG CATCCTGCGC TTCGCGGCCG CCTGA
|
Protein sequence | MHKKTDTADK PHDDLRFLLE SHPGPDQVVD IAPGVLWLRL KLPFRLNHVN IYLLADGDGW AMVDTGFGND TTIAAWETLF DGALKGFAIS RVIVTHAHPD HFGQAGWIVQ RFRCPFYMSQ IEYLQGVYHQ NRRSEERLVN SREFFHRHGM DDSITAQLLG RGQDYLKRAV PLPAAYRRLT KGDHIRIGTR TFRIITGAGH SPDQVMLYCA ADKLFLSADQ VLSKISPNVS VWAHEPDEDA LGSYLKSLAE LTTLLPDDVL VLPGHGLPFH GVKTRIKQLA DHHEERCGVI AEACRDRAMS SAELVPVVFH KHVLDAHQTG FAAGELIAHV NYMLARNRLT IVDKADGILR FAAA
|
| |