| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4562 |
|---|
| Symbol | |
|---|
| ID | 3912379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 5157698 |
|---|
| End bp | 5158762 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637886466 |
|---|
| Product | Beta-lactamase-like |
|---|
| Protein accession | YP_488156 |
|---|
| Protein GI | 86751660 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.809352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAGA AGACCGACAC CGCCGACAAA CCCCACGACG ATCTGCGCTT TCTGCTGGAG
AGCCACCCCG GACCCGACCA GGTCGTCGAC ATCGCCCCGG GCGTGCTGTG GCTGCGGCTG
AAGCTGCCGT TCCGCCTCAA CCACGTGAAC ATCTATCTGC TCGCCGATGG CGACGGCTGG
GCGATGGTCG ACACCGGCTT CGGCAACGAC ACCACGATCG CGGCCTGGGA AACGCTGTTC
GACGGCGCGC TCAAAGGCTT CGCCATCAGC CGCGTGATCG TGACCCACGC CCACCCCGAC
CATTTCGGCC AGGCCGGCTG GATCGTGCAG CGGTTCCGCT GCCCGTTCTA CATGTCGCAG
ATCGAATATC TGCAGGGCGT CTATCATCAG AACCGCCGCA GCGAGGAGCG GCTCGTCAAT
TCGCGCGAGT TCTTCCACCG CCACGGCATG GACGACTCCA TCACCGCGCA ATTGCTCGGC
CGCGGTCAGG ACTATCTGAA GCGCGCGGTG CCGCTTCCGG CGGCGTATCG ACGACTCACC
AAGGGCGACC ACATCCGGAT CGGCACACGG ACGTTTCGCA TCATCACCGG CGCCGGCCAC
TCGCCCGATC AGGTGATGCT GTATTGCGCC GCCGACAAGC TGTTTCTCTC CGCCGATCAG
GTGCTGAGCA AGATCTCCCC CAATGTCAGC GTCTGGGCGC ACGAGCCGGA CGAAGACGCG
CTCGGCTCCT ATCTGAAATC ACTCGCCGAA CTGACCACGC TGCTACCGGA CGATGTGCTG
GTGCTGCCGG GTCACGGCCT GCCCTTCCAC GGCGTCAAGA CCCGTATCAA GCAGCTCGCC
GATCATCACG AGGAACGCTG CGGCGTGATC GCGGAGGCCT GCCGCGACCG GGCGATGAGT
TCCGCCGAGC TGGTGCCGGT GGTGTTCCAC AAGCACGTGC TGGATGCGCA CCAGACCGGC
TTTGCGGCCG GCGAACTGAT CGCGCATGTC AACTACATGC TGGCGCGCAA CCGCCTGACG
ATCGTCGACA AGGCCGACGG CATCCTGCGC TTCGCGGCCG CCTGA
|
|---|
| Protein sequence | MHKKTDTADK PHDDLRFLLE SHPGPDQVVD IAPGVLWLRL KLPFRLNHVN IYLLADGDGW
AMVDTGFGND TTIAAWETLF DGALKGFAIS RVIVTHAHPD HFGQAGWIVQ RFRCPFYMSQ
IEYLQGVYHQ NRRSEERLVN SREFFHRHGM DDSITAQLLG RGQDYLKRAV PLPAAYRRLT
KGDHIRIGTR TFRIITGAGH SPDQVMLYCA ADKLFLSADQ VLSKISPNVS VWAHEPDEDA
LGSYLKSLAE LTTLLPDDVL VLPGHGLPFH GVKTRIKQLA DHHEERCGVI AEACRDRAMS
SAELVPVVFH KHVLDAHQTG FAAGELIAHV NYMLARNRLT IVDKADGILR FAAA
|
|---|
| |