Gene RPB_4534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4534 
Symbol 
ID3912351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5127290 
End bp5128234 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content69% 
IMG OID637886438 
Productalpha/beta hydrolase fold 
Protein accessionYP_488128 
Protein GI86751632 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG TCTCGATTCC CGCCAATCCG GTTCCCGAGG GCGCCGTCTC CGGCACCATC 
AAGACCCCCG ACGGCGCCGA GCTGCGGTTC GCGCGATGGC CGCCGCCGGC CGGGCGCAAG
GGCACGGTGT GCGTCTTCAC CGGCCGCACC GAGCAGATCG AGAAGTATTT CGAGACGGTG
CGCGACCTGC AGGACCGCGG CTTCGCGGTG GCGATGATCG ACTGGCGCGG CCAGGGCCAT
TCGGCGCGGC GGCTGAAGGA TTTCCGCAAG GGCTATGTCC GCAACTTCTC GGACTTCGAG
ATCGACGTCG AGACCTTCGT GCGCGAGGTG GTGCTGCCGG ACTGTCCGCC GCCGCATTTC
GCGCTGGCGC ATTCGATGGG CGGCGCGGTG ATGCTGCGGA TCGCCTATTC CGGCAAGCGC
TGGTTCGACC GCATGGTGCT GTCGGCGCCG ATGATCGACC TGCCGGGCCG CGCCACCTCG
CTGCCGGTGC GGCTGCTGCT GCGGGCGATG CGGCTCGCCG GCCAGGGCGG CCGCTACGTG
CCCGGCGGCA ACGACGTGCT CGCCAACACC GAGCCGTTCG CCGGCAACCC TTTGACCTCC
GACCCGGTGC GCTACGCCCG CAATGCCGCG ATCATCGCCG AGGACCCGAC GCTCGGCCTC
GGCTCGCCGA CCATCGCCTG GGCGGATACC GCGTTCCGCA CCATGCACGG CTTCCGCGCG
GCGGACTATC CGTCGCGGAT CCGGCAGCCG ATCCTGATGC TCGCCGCCAG CCATGATACC
ATCGTCTCGA CTGCCGCGAT CGAGGAGTTC GCCTATCATC TGCGCGCGGG CTCGCATCTG
GTGATCGCCG GCGCCAAGCA CGAGATCCTG CAGGAGCAGG ATCGCTACCG CCAGCAATTC
TGGGCGGCGT TCGACGCCTT CGTGCCCGGC ACGCCACTGT TCTGA
 
Protein sequence
MTLVSIPANP VPEGAVSGTI KTPDGAELRF ARWPPPAGRK GTVCVFTGRT EQIEKYFETV 
RDLQDRGFAV AMIDWRGQGH SARRLKDFRK GYVRNFSDFE IDVETFVREV VLPDCPPPHF
ALAHSMGGAV MLRIAYSGKR WFDRMVLSAP MIDLPGRATS LPVRLLLRAM RLAGQGGRYV
PGGNDVLANT EPFAGNPLTS DPVRYARNAA IIAEDPTLGL GSPTIAWADT AFRTMHGFRA
ADYPSRIRQP ILMLAASHDT IVSTAAIEEF AYHLRAGSHL VIAGAKHEIL QEQDRYRQQF
WAAFDAFVPG TPLF