Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4533 |
Symbol | |
ID | 3912350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5126600 |
End bp | 5127076 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637886437 |
Product | heat shock protein Hsp20 |
Protein accession | YP_488127 |
Protein GI | 86751631 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.913477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTACTT TCGATCTCAC CCCGTTCTAT CGCTCCACTG TCGGCTTCGA CCGCCTGTTC AATCTGCTGG ACCAGACCTC CGCCGAGGCG GCCCCCGGCT ATCCGCCCTA TAATATCGAG CGGACCGGCG AGAATGCCTA TCGGATCAGC GTCGCGGTCT CCGGCTTCTC CCCGGCCGAA CTGTCGATCG TGACCAAGGA AAACCAGCTC ACGATCAAGG GCGAGAAGAC CGCCAACGAG AACGGCGGCA AGTCCGAGGT GCTGTATCGC GGCATCGCCG CGCGCGCCTT CGAACGGGCA TTCCAGCTCG CCGACTACGT CACGGTGAAG ACCGCCAGCC TCGAGAACGG CCTGCTCCAC GTCGATCTCG TGCGCGAGAT TCCCGAGGCG AAGAAGCCGC GCAGCATCCC GATCAGCACC ACCGCGGTCT CCGCGCCGCA GGTGGTCGAC CACGCCGGCG ACAAGGCGGC GGCGTAA
|
Protein sequence | MRTFDLTPFY RSTVGFDRLF NLLDQTSAEA APGYPPYNIE RTGENAYRIS VAVSGFSPAE LSIVTKENQL TIKGEKTANE NGGKSEVLYR GIAARAFERA FQLADYVTVK TASLENGLLH VDLVREIPEA KKPRSIPIST TAVSAPQVVD HAGDKAAA
|
| |