Gene RPB_4533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4533 
Symbol 
ID3912350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5126600 
End bp5127076 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID637886437 
Productheat shock protein Hsp20 
Protein accessionYP_488127 
Protein GI86751631 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.913477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTT TCGATCTCAC CCCGTTCTAT CGCTCCACTG TCGGCTTCGA CCGCCTGTTC 
AATCTGCTGG ACCAGACCTC CGCCGAGGCG GCCCCCGGCT ATCCGCCCTA TAATATCGAG
CGGACCGGCG AGAATGCCTA TCGGATCAGC GTCGCGGTCT CCGGCTTCTC CCCGGCCGAA
CTGTCGATCG TGACCAAGGA AAACCAGCTC ACGATCAAGG GCGAGAAGAC CGCCAACGAG
AACGGCGGCA AGTCCGAGGT GCTGTATCGC GGCATCGCCG CGCGCGCCTT CGAACGGGCA
TTCCAGCTCG CCGACTACGT CACGGTGAAG ACCGCCAGCC TCGAGAACGG CCTGCTCCAC
GTCGATCTCG TGCGCGAGAT TCCCGAGGCG AAGAAGCCGC GCAGCATCCC GATCAGCACC
ACCGCGGTCT CCGCGCCGCA GGTGGTCGAC CACGCCGGCG ACAAGGCGGC GGCGTAA
 
Protein sequence
MRTFDLTPFY RSTVGFDRLF NLLDQTSAEA APGYPPYNIE RTGENAYRIS VAVSGFSPAE 
LSIVTKENQL TIKGEKTANE NGGKSEVLYR GIAARAFERA FQLADYVTVK TASLENGLLH
VDLVREIPEA KKPRSIPIST TAVSAPQVVD HAGDKAAA