| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4531 |
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| Symbol | |
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| ID | 3912348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5120394 |
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| End bp | 5125133 |
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| Gene Length | 4740 bp |
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| Protein Length | 1579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886435 |
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| Product | glutamate synthase ferredoxin subunit |
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| Protein accession | YP_488125 |
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| Protein GI | 86751629 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.688027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.696569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGT CTGAGGTTGA GCGCGAGAAC ATGGTTGCCA ATGCGCTGAC GGCGGGCCCG
GCCGTGAAAA CGCACGCCTC TTCGGACGCG CGCGAGCACG ATTGGCGTCC GCCGGCCGAG
GGCCTGTACG ACCTGTCGCG CGAGAAGGAC GCCTGCGGCG TCGGCTTCAT CGCCAACATC
AAGGGCGTCA AGTCGCATCA GATCGTCGCC GATGCGATCC GGATTCTGTG CAACCTCGAG
CACCGCGGCG CAGTCGGCGC CGACCCGCGC GCCGGCGACG GCGCCGGCAT TCTGGTGCAA
ATTCCGCACG CCTTCTTCAA CCGCAAGGCC TCCGAGCTCG GTTTCACGCT GCCGGCGCCG
GGCGAATACG CCGTCGGCGC GCTGTTCATG CCGCGCGACA CCTCGTGGCG GAAGGTGATC
CAGAGCATCG TCGCCGACCA GATCAAGGCC GAGGGCCTGA CGCTGCTGGG CTGGCGCGAC
GTACCGACCG ACAATTCGTC GCTGGGCGAA ACCGTCAAGC CGACCGAACC CGCCAACATG
CAGGTGTTCA TCGGCCGCGG CGGCGCGATC AAGACCGAGG ACGAGTTCGA GCGCCATCTC
TACATCATGC GCAAGTCGAT CTCGAACGCG GTGTATCAGC GTCGCGAGCG CGGCTTCGCC
GGCTACTACC CGGTGTCGCT GTCGTGCCGC ACCGTGATCT ACAAGGGCAT GTTCCTGGCC
GATCAGCTCG GCAAGTACTA TCCCGACCTC AGCGATCCGG ATTTCGAAAG CGCGCTGGCG
CTGGTGCATC AGCGGTTCTC GACCAACACC TTCCCGACCT GGTCGCTGGC GCATCCCTAC
CGCATGGTCG CGCATAACGG CGAGATCAAC ACGCTGCGCG GCAACGTCAA CTGGATGGCG
GCGCGGCAGG CCTCGGTGCA CTCCAAGCTG TACGGCAAGG ACATCAGCCG GCTGTGGCCG
ATCTCCTATG AGGGCCAGTC CGACACCGCC TGTTTCGACA ACGCGCTCGA ATTCCTGGTG
CGCGGCGGCT ATTCGCTGCC GCACGCGGTG ATGATGATGA TCCCGGAGGC GTGGGCCGGC
AATCCGCTGA TGGACGAGCA GCGCCGCTCG TTCTACGAAT ATCACGCCGC GCTGATGGAG
CCGTGGGACG GCCCGGCGGC GCTCGCCTTC ACCGACGGCC GCCAGATCGG TGCCACGCTG
GACCGCAACG GCCTGCGCCC GGCGCGCTAT CTGGTCACCC GCGACGACCG CATCGTGATG
GCGTCCGAAA TGGGCGTGCT GAAGATTCCG GAGGACCAGA TCGTCACCAA GTGGCGGCTG
CAGCCCGGCA AGATGCTGCT GGTCGACCTG GTCGAGGGCC GCCTCATTCC CGACGACGAG
ATCAAGGCGC AGCTCGCCGC CAGCCAGCCC TATCGCGAAT GGCTCGGCCG CACCCAGATC
GTGCTCGAGG AACTGCCGGA CGCGCCGGTC AAGGGCCAGC GCTCCAACCT GCCGCTGCTC
GATCGCCAGC AGGCGTTCGG CTATACCCAG GAGGACATCT CGATCCTGAT GACGCCGATG
GCGTCGACCG GCGAGGAAGC CTCGGGCTCG ATGGGCAACG ACACGCCGCT GTCGGCGCTG
TCGGACAAGC CGAAGCCGCT GTTCACCTAC TTCAAGCAGA ACTTCGCCCA GGTCACCAAC
CCGCCGATCG ATCCGATCCG CGAGGAGCTG GTGATGAGCC TGGTCTCGAT CATCGGGCCG
CGGCCGAACC TGTTCGACAC CCAGGGCATC GCCGGCACCA AGCGGCTCGA AGTCCGCCAG
CCGATCCTCA CCGACGGCGA CCTTGAGAAA ATCCGTTCGA TCTCCGAGAT CGGCGATCCG
CATTTCAAGT CGCGCACGCT CGACACCACC TTCCACACCG CGCTCGGCGC CGCCGGCCTC
GAGCAGGTGC TGGAGGATCT GTCGGCGCGG GCCGAAGCCG CGGTGCGCGA CGGCGTCAAC
ATCATCATCC TCAGCGACCG CGCCGCCGGC GCCGACCGGA TTCCGATCCC GTCGCTGCTC
GCCTGCGCTG CCGTACATCA TCATCTGATC CGCGTCGGGC TCCGAACCTC GGTCGGCTTG
GTGGTCGAAT CCGGCGAGCC GCGCGAGGTG CATCACTTCG CCTGTCTGGC CGGCTACGGC
GCCGAGGCGA TCAACCCGTA TCTCGCCTTC GAGACCATCA TCGCGCTCAA GGATCGGCTG
CCGGCCAAGC TCGACGACTA CGAGATCGTC AAGCGCTACA TCAAGTCGAT CGGCAAGGGG
CTGCTGAAGG TGATGTCCAA GATGGGCATC TCGACCTATC AGTCGTATTG CGGCGCGCAG
ATCTTCGACG CGGTCGGGCT GCGCAACGAT TTCATCGCCA AGTACTTCGC CGGCACGCAT
TCGCAGATCG AGGGCGTCGG CCTCGCGCAG ATCGCCGAGG AAACCGTGCG CCGTCATCAC
GACGCGTTCG GCGACGCGCT GGTCTACAAG ACCGCGCTCG ATGTCGGCGG CGAATATGCC
TACCGCTCGC GCGGCGAGGA CCACGCCTGG ACGGCGGATT CGGTGGCGAC GCTGCAGCAC
GCGGTGCGCG GCAATTCGGT CGAGCGCTAT CGCGCCTTCG CCCGCATTCT CAACGAGCAG
CAGGAGCGTC TGTTGACGCT GCGCGGCCTG TTCCGGATCA AGGGCGCCGA GGCCGAGGGC
CGCAAGCCGG TGCCGATCGA GGAGGTCGAG CCCGCCGCCG AGATCGTCAA GCGCTTCGCC
ACCGGCGCGA TGAGCTTCGG CTCGATCTCG CGTGAGGCGC ACAGCACGCT GGCGATCGCG
ATGAACCGCA TCGGCGGCAA GTCGAACACC GGCGAGGGCG GCGAGGAAGC CGACCGCTTC
AAGCCGATGG CCAACGGCGA TTCGATGCGC TCGGCGATCA AGCAGATCGC TTCGGGCCGG
TTCGGCGTCA CCACGGAATA TCTCGCCAAT TCCGACATGA TGCAGATCAA GATGGCGCAG
GGCGCCAAGC CCGGCGAGGG CGGACAGTTG CCCGGCCACA AGGTCGACGC CACCATCGCG
GCGGTGCGGC ACTCGACGCC CGGCGTCGGC CTGATCTCGC CGCCGCCGCA TCACGACATC
TATTCGATCG AGGATCTGGC GCAGCTCATC TACGATCTGA AGAACGTCAA TCCGCAGAGC
GCGGTCTCGG TCAAGCTGGT GTCGGAAATC GGCGTAGGCA CCGTCGCGGC CGGCGTCGCC
AAGGCGCGCG CCGACCACGT CACCATCGCG GGCTTCGAAG GCGGCACCGG CGCCTCGCCG
CTGACCTCGA TCAAGCACGC CGGCTCGCCC TGGGAAATCG GTCTCGCCGA GACGCACCAG
ACGCTGGTGC GCGAGCGGCT GCGCTCGCGC ATCGTCGTTC AGGTCGACGG TGGCTTCCGC
ACCGGCCGCG ACGTCGTGAT CGGCGCGCTG CTGGGTGCCG ACGAGTTCGG CTTCGCCACC
GCGCCGCTGA TCGCGGCCGG CTGCATCATG ATGCGCAAGT GCCATCTCAA CACCTGCCCG
GTCGGCGTCG CCACCCAGGA CCCGGTGCTG CGCAAGCGCT TCACCGGCCA GCCCGAGCAT
GTCATCAACT ACTTCTTCTT CGTCGCCGAG GAAGTCCGCG AGCTGATGGC GTCGCTCGGC
TATCGCAGCT TCAACGAGAT GGTCGGCCAG TCGCAGATGC TCGACCAACA GGCGTTGGTG
GCGCACTGGA AGGCGAAGGG CCTCGACTTC TCCAAGCTGT TCCACAAGCA GAAGGCCGAA
AAGGGCCAGA CGATCTATCA CTCCGAGCTC CAGGATCATC ACCTCGACAA GGTGCTCGAC
CGCACCCTGA TCGCCAACGC GCAGGCCGCG ATCGACCGCG GCGCGCCGGT GAAGTTCGAG
GTCGAGATCA ACAACACCAA CCGCTCGGCC GGCGCGATGC TGTCCGGTGT CGTCGCCAAG
CATTACGGCC ATGCCGGGCT GCCGCACGAC ACCATCCAGG TGCACCTCAA GGGCACCGCC
GGGCAGGCGT TCGGCGCCTG GCTGGCGCGC GGCATCACCT TCGACCTCGA AGGCGAAGGC
AACGACTATG TCGGCAAGGG CCTCTCCGGC GGCAAGATCA TCGTTCGCCC GCCGGCGATC
TCCGGCATCG TGCCCGAGGA GTCGATCATC GTCGGCAACA CCGTGATGTA CGGCGCGATC
GAGGGCGAGT GCTACTTCCG CGGCATCGCC GGCGAGCGCT TCGCGGTGCG CAATTCCGGC
GCCGTCGCGG TGGTCGAGGG CGCCGGCGAT CATTGCTGCG AATACATGAC CGGCGGCATC
GTCGTCGTGC TCGGCAAGAC CGGCCGCAAC TTCGCCGCCG GCATGTCGGG CGGCGTCGCC
TATGTGCTGG ACGAGGACGG TGCGTTCGGC AAGCTGTGCA ACATGGCGAT GGTCGAGCTC
GAGCCGGTGC TGTCGGAGGA GATGATCAAC GCCAACGCGT ATCATCAGTC CGGCGATCTG
GAGGTGCACG GCCGGGTCGA CGTGTTCGCC GATCTGCTCG GCTTCGACAT CGAGCGGCTG
CACGTGCTGA TCTCGCGCCA CGCCAAATAC ACCGGCTCCA AGCGCGCCGC CGAGATCCTG
GCGAACTGGA AAGAGTGGCT GCCGAAGTTC CGCAAGGTGA TGCCGGTCGA GTACCGCCGC
GCTTTGCGCG AGCTGAAAGC ACGCCAGGCC GAGGAGCCCA AGATCGCGAT CGGGGCTTAA
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| Protein sequence | MSGSEVEREN MVANALTAGP AVKTHASSDA REHDWRPPAE GLYDLSREKD ACGVGFIANI
KGVKSHQIVA DAIRILCNLE HRGAVGADPR AGDGAGILVQ IPHAFFNRKA SELGFTLPAP
GEYAVGALFM PRDTSWRKVI QSIVADQIKA EGLTLLGWRD VPTDNSSLGE TVKPTEPANM
QVFIGRGGAI KTEDEFERHL YIMRKSISNA VYQRRERGFA GYYPVSLSCR TVIYKGMFLA
DQLGKYYPDL SDPDFESALA LVHQRFSTNT FPTWSLAHPY RMVAHNGEIN TLRGNVNWMA
ARQASVHSKL YGKDISRLWP ISYEGQSDTA CFDNALEFLV RGGYSLPHAV MMMIPEAWAG
NPLMDEQRRS FYEYHAALME PWDGPAALAF TDGRQIGATL DRNGLRPARY LVTRDDRIVM
ASEMGVLKIP EDQIVTKWRL QPGKMLLVDL VEGRLIPDDE IKAQLAASQP YREWLGRTQI
VLEELPDAPV KGQRSNLPLL DRQQAFGYTQ EDISILMTPM ASTGEEASGS MGNDTPLSAL
SDKPKPLFTY FKQNFAQVTN PPIDPIREEL VMSLVSIIGP RPNLFDTQGI AGTKRLEVRQ
PILTDGDLEK IRSISEIGDP HFKSRTLDTT FHTALGAAGL EQVLEDLSAR AEAAVRDGVN
IIILSDRAAG ADRIPIPSLL ACAAVHHHLI RVGLRTSVGL VVESGEPREV HHFACLAGYG
AEAINPYLAF ETIIALKDRL PAKLDDYEIV KRYIKSIGKG LLKVMSKMGI STYQSYCGAQ
IFDAVGLRND FIAKYFAGTH SQIEGVGLAQ IAEETVRRHH DAFGDALVYK TALDVGGEYA
YRSRGEDHAW TADSVATLQH AVRGNSVERY RAFARILNEQ QERLLTLRGL FRIKGAEAEG
RKPVPIEEVE PAAEIVKRFA TGAMSFGSIS REAHSTLAIA MNRIGGKSNT GEGGEEADRF
KPMANGDSMR SAIKQIASGR FGVTTEYLAN SDMMQIKMAQ GAKPGEGGQL PGHKVDATIA
AVRHSTPGVG LISPPPHHDI YSIEDLAQLI YDLKNVNPQS AVSVKLVSEI GVGTVAAGVA
KARADHVTIA GFEGGTGASP LTSIKHAGSP WEIGLAETHQ TLVRERLRSR IVVQVDGGFR
TGRDVVIGAL LGADEFGFAT APLIAAGCIM MRKCHLNTCP VGVATQDPVL RKRFTGQPEH
VINYFFFVAE EVRELMASLG YRSFNEMVGQ SQMLDQQALV AHWKAKGLDF SKLFHKQKAE
KGQTIYHSEL QDHHLDKVLD RTLIANAQAA IDRGAPVKFE VEINNTNRSA GAMLSGVVAK
HYGHAGLPHD TIQVHLKGTA GQAFGAWLAR GITFDLEGEG NDYVGKGLSG GKIIVRPPAI
SGIVPEESII VGNTVMYGAI EGECYFRGIA GERFAVRNSG AVAVVEGAGD HCCEYMTGGI
VVVLGKTGRN FAAGMSGGVA YVLDEDGAFG KLCNMAMVEL EPVLSEEMIN ANAYHQSGDL
EVHGRVDVFA DLLGFDIERL HVLISRHAKY TGSKRAAEIL ANWKEWLPKF RKVMPVEYRR
ALRELKARQA EEPKIAIGA
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