Gene RPB_4524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4524 
Symbol 
ID3912341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5112589 
End bp5113521 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content67% 
IMG OID637886428 
ProductPhage integrase 
Protein accessionYP_488118 
Protein GI86751622 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCA GCAAACCTAT CGTGAGCTTT CTCGATCATT GCTCGGTCGA GCGGCAGTTG 
TCGGACCATA CGTTGCAGGC TTACGGCTAC GATCTGGCGG ATTTTGCCGC GTGGGTGGGG
ACGCGGCGGC GGAAGGACAA GGCCTTCTCC GCCGGTGCGC CAATCGAGAC CGACCACCTG
CGCGCCTATC TCGAGCACAT GACCGAGCGG AAGCTGTCGG CTGCGACGGT GCGGCGGCGG
CTCGCTTGCT TGCGGTCGTT TTTCCGCTAC CTGGAAGATC GCGGCACGAT GCCCAATCCT
TTCGATGGCT GGCGACTGAA GCTGCCGAAG CGCAAGCGGT TGCCGCGGAC GCTGTCGCGC
GACGAGACCA CGCAGCTGCT GAAATCGGCG CGAGCGCCGG GTGCGGCCCG GCATGCAGCA
CCCGAGTCGC CATCGCTGTG CACCGAAATC CGGCTGATGA TCGCCACCGG CATCCGGATC
GGCGAACTCT GCAAGATCGC CAGCACCGAC GTCTCCAGCG ACGGCGCGGC GATCCGGATT
CACGGCAAGG GCTCGCGCGA CCGGATGGTG TACGTCACCG ACAACGGCCT GCGCGCCGAG
CTTCGCAAGC TCGCGGTGCT GCGCCAGCGT ACGCTCGGCG GCGATGGGCC GCTGTTCCTC
AACCGCAACG GCGACAAGCT GCGGCCGCAT TCGTTTCGTG CCAAGCTGCG CAATTTTGCG
GGGCAAGCCG GCGTCCGCCG CCGCGTCACG CCGCACATGC TTCGCCACAC CGCGGCGACG
CTGCTGATCG AGAGCGGCGT GGATATCCGG ATCGTGCAGC GGCTGCTCGG CCATTCGAGC
ATCGCCACCA CCGAGATCTA CACCCACGTC TCCGACGAGG CGCTGCGGTC GACGCTGGCG
CGCGCGAACA TTCTCGCCGG GCTGGCGCGC TAA
 
Protein sequence
MTLSKPIVSF LDHCSVERQL SDHTLQAYGY DLADFAAWVG TRRRKDKAFS AGAPIETDHL 
RAYLEHMTER KLSAATVRRR LACLRSFFRY LEDRGTMPNP FDGWRLKLPK RKRLPRTLSR
DETTQLLKSA RAPGAARHAA PESPSLCTEI RLMIATGIRI GELCKIASTD VSSDGAAIRI
HGKGSRDRMV YVTDNGLRAE LRKLAVLRQR TLGGDGPLFL NRNGDKLRPH SFRAKLRNFA
GQAGVRRRVT PHMLRHTAAT LLIESGVDIR IVQRLLGHSS IATTEIYTHV SDEALRSTLA
RANILAGLAR