Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4524 |
Symbol | |
ID | 3912341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5112589 |
End bp | 5113521 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637886428 |
Product | Phage integrase |
Protein accession | YP_488118 |
Protein GI | 86751622 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCA GCAAACCTAT CGTGAGCTTT CTCGATCATT GCTCGGTCGA GCGGCAGTTG TCGGACCATA CGTTGCAGGC TTACGGCTAC GATCTGGCGG ATTTTGCCGC GTGGGTGGGG ACGCGGCGGC GGAAGGACAA GGCCTTCTCC GCCGGTGCGC CAATCGAGAC CGACCACCTG CGCGCCTATC TCGAGCACAT GACCGAGCGG AAGCTGTCGG CTGCGACGGT GCGGCGGCGG CTCGCTTGCT TGCGGTCGTT TTTCCGCTAC CTGGAAGATC GCGGCACGAT GCCCAATCCT TTCGATGGCT GGCGACTGAA GCTGCCGAAG CGCAAGCGGT TGCCGCGGAC GCTGTCGCGC GACGAGACCA CGCAGCTGCT GAAATCGGCG CGAGCGCCGG GTGCGGCCCG GCATGCAGCA CCCGAGTCGC CATCGCTGTG CACCGAAATC CGGCTGATGA TCGCCACCGG CATCCGGATC GGCGAACTCT GCAAGATCGC CAGCACCGAC GTCTCCAGCG ACGGCGCGGC GATCCGGATT CACGGCAAGG GCTCGCGCGA CCGGATGGTG TACGTCACCG ACAACGGCCT GCGCGCCGAG CTTCGCAAGC TCGCGGTGCT GCGCCAGCGT ACGCTCGGCG GCGATGGGCC GCTGTTCCTC AACCGCAACG GCGACAAGCT GCGGCCGCAT TCGTTTCGTG CCAAGCTGCG CAATTTTGCG GGGCAAGCCG GCGTCCGCCG CCGCGTCACG CCGCACATGC TTCGCCACAC CGCGGCGACG CTGCTGATCG AGAGCGGCGT GGATATCCGG ATCGTGCAGC GGCTGCTCGG CCATTCGAGC ATCGCCACCA CCGAGATCTA CACCCACGTC TCCGACGAGG CGCTGCGGTC GACGCTGGCG CGCGCGAACA TTCTCGCCGG GCTGGCGCGC TAA
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Protein sequence | MTLSKPIVSF LDHCSVERQL SDHTLQAYGY DLADFAAWVG TRRRKDKAFS AGAPIETDHL RAYLEHMTER KLSAATVRRR LACLRSFFRY LEDRGTMPNP FDGWRLKLPK RKRLPRTLSR DETTQLLKSA RAPGAARHAA PESPSLCTEI RLMIATGIRI GELCKIASTD VSSDGAAIRI HGKGSRDRMV YVTDNGLRAE LRKLAVLRQR TLGGDGPLFL NRNGDKLRPH SFRAKLRNFA GQAGVRRRVT PHMLRHTAAT LLIESGVDIR IVQRLLGHSS IATTEIYTHV SDEALRSTLA RANILAGLAR
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