| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4521 |
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| Symbol | |
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| ID | 3912338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5108270 |
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| End bp | 5109664 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886425 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_488115 |
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| Protein GI | 86751619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.758716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA CTGGCAACAG GCTAGCGCGG GTCGCAGGGA TGGCCGTACT CGGCGCCGTG
CTGCACACGG GCGCCGCGCA GGCGCAGAAC CCGTTCGACG TGTTCAATCT GTTCGGCGGC
AAGAGCGCCG CGCCGAATGC GCCGCAGCCC GCCAATGTCG GCCCGCAAAA GCCCGCTTCG
CAGCAAGGCA GCAGCGCTGC GCCGCCGTGG AGCGGCGAGG ACGGCGGCTC CGGCCATCCG
ACGATGACCG CGCAGGCGAT CCGCGAGGCC GCCGCCAATT TCGACAATTG CGTCGCCGGC
TTCTGGCCGG ACGCTCAGCG CCGCGGCATC TCGCGCGACA GCTTCGCGCG CTTCACCGCG
GGGCTGTCGC CCGATCTGCG GCTGATGGAC CTGATGGATT CGCAGCCGGA ATTCACCAAG
GCGATCTGGG AGTATCTCGA CATCCTGGTG AACGACAACA GGATGGCGCG GGGCCGCGAG
ATCCTGGCGC AATACAAGCC GCAATTCGAC GCGGTGGAGC GCGCGTATGG CGTCGACCGC
TACATCATTG CGTCGATCTG GGGCATCGAG TCGAACTACT CGACCCAGAT GGGCGACCGC
TATGTGCTGA ACTCGACCGC GACGCTGGCC TGCGTCGGCC GCCGCCAAAA CTACTTCAAG
GACGAATTCC TCACCGCGTT GGAGATCCTG CATCGCGGCG ATCTGCGTCC CGAGCAGTTG
CGCGGCTCGT GGGCCGGCGC GTTCGGCCCG ACGCAGTTCA TGCCGACCGC GTTCAAGCGC
TTCGCCGTCG ACGCCGACGG CGACGGCCGC CGCGACGTCG TCGACAATCC CGCCGACCTG
ATCGCCTCGA CCGCCAACAA CCTCAAGAAG GACGGCTGGC AGAGCGGCCA GACCTGGGGC
TACGAGGTCG CGGTGCCGCG CGGCTTCGAC TACATGAAGG CCGACCGCAA GCAGATGCTG
ACGCTGGCGC GATGGGAAGA GCTCGGCGTC CGCCGCCCGA ACGGCCAGCC GTTCCCGCGC
GGCGGCGAAA AGGCCTATCT GCTGGCGCCC GCCGGCGCCG AAGGCCCCGG CTTCCTGATG
CTGACCAATT TCCGCGTCAT CATGAAGTAC AACCCCGCCG AAGCCTATGC GCTGGCGATC
GGCCATTTCG CCGACCGCCT GCGCGGCGGT CCGCCCTTCG TCCAGCCCTG GCCGCGCCAC
GAACGCGTGC TGTCCCGCAG CGAACGCCTC GAACTGCAAC AACTCCTCGC CCAACGCGGC
TTCTACCGCG GCACCCCCGA CGGCCAATTC GGCAGCCTGA CGCGGGAAGG ACTCCGGAAT
TTCCAGGCGT CCATTGGGGC CCCGGCGGAT GGATTTGCCA CGGGGGAGAT GCTGGAGAGG
TTGAGAGGAA GGTAG
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| Protein sequence | MTETGNRLAR VAGMAVLGAV LHTGAAQAQN PFDVFNLFGG KSAAPNAPQP ANVGPQKPAS
QQGSSAAPPW SGEDGGSGHP TMTAQAIREA AANFDNCVAG FWPDAQRRGI SRDSFARFTA
GLSPDLRLMD LMDSQPEFTK AIWEYLDILV NDNRMARGRE ILAQYKPQFD AVERAYGVDR
YIIASIWGIE SNYSTQMGDR YVLNSTATLA CVGRRQNYFK DEFLTALEIL HRGDLRPEQL
RGSWAGAFGP TQFMPTAFKR FAVDADGDGR RDVVDNPADL IASTANNLKK DGWQSGQTWG
YEVAVPRGFD YMKADRKQML TLARWEELGV RRPNGQPFPR GGEKAYLLAP AGAEGPGFLM
LTNFRVIMKY NPAEAYALAI GHFADRLRGG PPFVQPWPRH ERVLSRSERL ELQQLLAQRG
FYRGTPDGQF GSLTREGLRN FQASIGAPAD GFATGEMLER LRGR
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