Gene RPB_4520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4520 
Symbol 
ID3912337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5107435 
End bp5108070 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID637886424 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_488114 
Protein GI86751618 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.286419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCA TTCACGATTT CTGGCTGTTC GTCGCCTCCG GGCTGCTGCT CAATGTCACG 
CCCGGGCCGG ACACCGCCTT CATCCTCGGT CGCGGGCTTC AATTCGGTTG GCGCGGCGGT
GCTGCGGCGG CGCTCGGCGT CAGCGCCGGC TGCCTGGTGC ACGTCACGGC GGCGGCGGTC
GGACTGTCGG CGCTGCTGAT GGCCTCGACG CTGGCCTTCA CCGCCGTCAA GCTGATCGGC
GCAGCCTATC TGGTCTGGCT CGGAATCGGC ATGCTGCTGT CGCGCGCGAC CAGCTTTGCG
GCGGCGTCGG ACGATGCGCC GACGCTGCGG CACGCGCAGG TGTTCCGCCA GGGCATGCTG
ACCAACGCGC TCAACCCGAA AGTGGCGCTG TTCTTCCTGG CCTTCCTGCC GCAATTCGTC
GATGCCGAGG CGCCTCACAA GGCGCTGGCG TTCCTGGTGC TCGGGCTGAT CTTCGTCGCC
AACGGCACGC TGTATTGCCT GGCGCTGGCG GCGTTCGCGG CGCGGGCGTC GGATCGGCTG
CGCCGCTCCG GCCGGGTGCT GCAATGGATC AATCGCGGGC TCGGCGCGCT GTTCGTGGCG
CTCGGCCTGC GCGTCGCGCT GATGCAGGCG CGCTGA
 
Protein sequence
MLGIHDFWLF VASGLLLNVT PGPDTAFILG RGLQFGWRGG AAAALGVSAG CLVHVTAAAV 
GLSALLMAST LAFTAVKLIG AAYLVWLGIG MLLSRATSFA AASDDAPTLR HAQVFRQGML
TNALNPKVAL FFLAFLPQFV DAEAPHKALA FLVLGLIFVA NGTLYCLALA AFAARASDRL
RRSGRVLQWI NRGLGALFVA LGLRVALMQA R