Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4520 |
Symbol | |
ID | 3912337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5107435 |
End bp | 5108070 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637886424 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_488114 |
Protein GI | 86751618 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.286419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCA TTCACGATTT CTGGCTGTTC GTCGCCTCCG GGCTGCTGCT CAATGTCACG CCCGGGCCGG ACACCGCCTT CATCCTCGGT CGCGGGCTTC AATTCGGTTG GCGCGGCGGT GCTGCGGCGG CGCTCGGCGT CAGCGCCGGC TGCCTGGTGC ACGTCACGGC GGCGGCGGTC GGACTGTCGG CGCTGCTGAT GGCCTCGACG CTGGCCTTCA CCGCCGTCAA GCTGATCGGC GCAGCCTATC TGGTCTGGCT CGGAATCGGC ATGCTGCTGT CGCGCGCGAC CAGCTTTGCG GCGGCGTCGG ACGATGCGCC GACGCTGCGG CACGCGCAGG TGTTCCGCCA GGGCATGCTG ACCAACGCGC TCAACCCGAA AGTGGCGCTG TTCTTCCTGG CCTTCCTGCC GCAATTCGTC GATGCCGAGG CGCCTCACAA GGCGCTGGCG TTCCTGGTGC TCGGGCTGAT CTTCGTCGCC AACGGCACGC TGTATTGCCT GGCGCTGGCG GCGTTCGCGG CGCGGGCGTC GGATCGGCTG CGCCGCTCCG GCCGGGTGCT GCAATGGATC AATCGCGGGC TCGGCGCGCT GTTCGTGGCG CTCGGCCTGC GCGTCGCGCT GATGCAGGCG CGCTGA
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Protein sequence | MLGIHDFWLF VASGLLLNVT PGPDTAFILG RGLQFGWRGG AAAALGVSAG CLVHVTAAAV GLSALLMAST LAFTAVKLIG AAYLVWLGIG MLLSRATSFA AASDDAPTLR HAQVFRQGML TNALNPKVAL FFLAFLPQFV DAEAPHKALA FLVLGLIFVA NGTLYCLALA AFAARASDRL RRSGRVLQWI NRGLGALFVA LGLRVALMQA R
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