Gene RPB_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4516 
Symbol 
ID3912333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5103409 
End bp5104296 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content66% 
IMG OID637886420 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_488110 
Protein GI86751614 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.686225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.729356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT TCGACGACGA ATTCTCGCCG GCCTTTGCGA TCGCCGAGCC GGCGGTCTGG 
CGTGCTCCGA TCATTTTCAA TTCGCCGCAT TCCGGTTCGG TGTATCCGGA CGCCTTCCTC
GACGCTTCCC GGATCGACCT CGAGGCGCTG CGGCGCTCCG AGGACTCGTT CATGGACGAG
TTGATCGACC ATCTTTACGA CCGCGGCTTT CCGGTGGTCC GGGTGCATTT TCCGCGGTCC
TATATCGACG TCAATCGCGA ACCCTACGAA CTCGATCCCC GCATGTTCCA CGGCCGGCTG
CCGAGTTTCG CCAACACCCG CTCGATGCGG GTCGCCGGGG GGCTCGGCAC GATTCCGCGC
ATGGTCGGCG ACGGCCAGGA GATCTATCGC GAGCGGATTC CGGTCGACGA GGCGCTCGGC
CGGATCGAGA CGCTGTACAA GCCGTATCAT CGCGCGCTGC GCCGGCTGGT GAACAAGGCG
CACCAGAGCT GGGGCACGGT GATCCTGGTC GATTGCCATT CGATGCCGTC GGTCGGCGTC
GCCCGTGACG AGCCGCGACG GCCCGACATC GTGATCGGCG ACCGCTACGG CACCAGCTGC
GCGCCGCTGA TTCCCGCTTT GGTCGAGGAA ACGTTGGCGG CGCGAGGCTA TTCGGTCGGC
CGCAACAAGC CCTATGCGGG CGGCTTCATC ACCGAGCACT ATGGCGACCC GTCGAACGGC
CTGCACGCCG TGCAGGTCGA ACTCAACCGC GCGATCTATA TGGACGAACG GTTGCGCCAG
CGCAGCGAGC GCTTCGAGCG GGTCGCCGAG GATTTCACCG TGCTGGCCGA CGCGCTCGCC
ACGATTCCGC AGGCCGATCT CGGACCGTTG CAGACCGCTG CAGAGTAA
 
Protein sequence
MTGFDDEFSP AFAIAEPAVW RAPIIFNSPH SGSVYPDAFL DASRIDLEAL RRSEDSFMDE 
LIDHLYDRGF PVVRVHFPRS YIDVNREPYE LDPRMFHGRL PSFANTRSMR VAGGLGTIPR
MVGDGQEIYR ERIPVDEALG RIETLYKPYH RALRRLVNKA HQSWGTVILV DCHSMPSVGV
ARDEPRRPDI VIGDRYGTSC APLIPALVEE TLAARGYSVG RNKPYAGGFI TEHYGDPSNG
LHAVQVELNR AIYMDERLRQ RSERFERVAE DFTVLADALA TIPQADLGPL QTAAE