Gene RPB_4487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4487 
Symbol 
ID3912303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5074427 
End bp5075425 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID637886390 
Producthypothetical protein 
Protein accessionYP_488081 
Protein GI86751585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.264247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.494269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTG GCCCCTCTTC CCGCCCGGCG ATGGAGATCG AACTCACCAA GCTGTCGTCG 
CCGCGGATTT TCCTGGTGCG GATGCTGGTG TTTCTGGTGC TGTGCGCGCT GATCACGGTG
GTGCTGTACA AGCAGGTCAT GGCCGCGTTC ATGGCCAATC CCGGGCTCAA CGGTCTGATC
TGCCTGGTGC TGCTGATCGG CATCGTGCTG GCGTTCCGGC AGGTGATCCG GCTGTATCCC
GAGGTCGCCT GGGTCAATAC ATTCCGCATC AGCGATCCGG GTCTGGCGAT CGAGCGGCGG
CCGACGCTGC TGGCGCCGAT GGCCGCCCTG CTCGGCGGCG AACGCAGCGG CCGAATCACG
ATCTCGCCGC AGATCATGCG GCATCTGCTG GATTCGATCG CGACCCGGCT GGACGAGGCG
CGCGACATCT CGCGCTACAT GACCGGACTC TTGGTGTTTC TGGGCCTGCT CGGCACGTTC
TGGGGCCTGA TCGAGACGGT CGGCGCGATC GGCGGGGTGA TCGGCGGGCT GAAGGTGACC
GGCGACGCCG GCTCGCTGTT CGATACGCTG AAAGAGGGCC TCGCCGCGCC GCTCGGCGGC
ATGGGCATCT CGTTCTCGTC GTCGCTGTTC GGCCTCGCCG GCTCGCTGGT GCTCGGCTTC
CTCGATCTGC AATCGAGCCA GGCGCAGAAC CGGTTCTATA CCGACCTCGA GGACTGGCTG
GCCTCGACCG TGCGCGGCGC CACCGCCGAC GGCGGCATCG CCGGCAGCGG CGATCTGCAG
AACGCAATCG AACGGCTGCG GCTGACGCTG GAGGACGGCG GTGCCAACCG CGCCACCACC
GCGGCGATGG CCAACCTCGC CGACGCGATT CAGAATCTCG TCGCCCATAT GCGCAACGAG
CAGCAGATGA TCCGCGAATG GGCCGACGCC CAGGGCGAGC AGAACCGCGA GATCAAGGAC
CTGCTGACCG CGATGGTGCG CCAGCGGGAG AAGAACTGA
 
Protein sequence
MASGPSSRPA MEIELTKLSS PRIFLVRMLV FLVLCALITV VLYKQVMAAF MANPGLNGLI 
CLVLLIGIVL AFRQVIRLYP EVAWVNTFRI SDPGLAIERR PTLLAPMAAL LGGERSGRIT
ISPQIMRHLL DSIATRLDEA RDISRYMTGL LVFLGLLGTF WGLIETVGAI GGVIGGLKVT
GDAGSLFDTL KEGLAAPLGG MGISFSSSLF GLAGSLVLGF LDLQSSQAQN RFYTDLEDWL
ASTVRGATAD GGIAGSGDLQ NAIERLRLTL EDGGANRATT AAMANLADAI QNLVAHMRNE
QQMIREWADA QGEQNREIKD LLTAMVRQRE KN