| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4479 |
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| Symbol | |
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| ID | 3912295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5069286 |
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| End bp | 5069888 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886382 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_488073 |
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| Protein GI | 86751577 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.100862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACGC CGCATCGCAT CGTGGTCGGC ATCAGCGGCG CATCGGGGGC CGCGGTCGGA
CTGCGCATCG TCGAACTGCT CGCCACCACG GATTGCGAGC TGCATCTCGT GGTGTCGGCG
GCGGCCGAGC GGACCATCGC CTACGAGGTC GGCGACAAGG CGCTCCACCA CACCCTCGAG
CTGGTCGACC GCCATCACGA TTTCAACGAT GTCGGCGCCA GCATCGCGTC GGGCTCGTTC
CGCACCAGCG GCATGATCGT GGCGCCGTGC TCGATCCGCA CGCTGTCGGC GATCGCCACC
GGCAATCTCG ACAATCTGCT GGTGCGCGCC GCCGACGTGC AGCTCAAGGA ACGCCGCCGG
CTGGTGCTGA TGCTGCGCGA GACGCCGCTG CATCTGGGCC ATATCCGCGC CATGGCGCAG
GTCACCGAAA TCGGCGGCAT CGTCGCGCCG ATCTCGCCGG CGTTCTATCA GCGACCACGC
TCATTGAGCG AGATGATCGA CCACATCGCG CTGCGCGCGA TCGGCCTGCT CGGCCTCGAC
GATCTGCAAT TGTCCGCGCC GGAATGGTCG GATGATACGC CTCCGACGTG TCCGAAGAGC
TGA
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| Protein sequence | MSTPHRIVVG ISGASGAAVG LRIVELLATT DCELHLVVSA AAERTIAYEV GDKALHHTLE
LVDRHHDFND VGASIASGSF RTSGMIVAPC SIRTLSAIAT GNLDNLLVRA ADVQLKERRR
LVLMLRETPL HLGHIRAMAQ VTEIGGIVAP ISPAFYQRPR SLSEMIDHIA LRAIGLLGLD
DLQLSAPEWS DDTPPTCPKS
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