| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4476 |
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| Symbol | |
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| ID | 3912292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5066110 |
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| End bp | 5067087 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886379 |
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| Product | peptidase U32 |
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| Protein accession | YP_488070 |
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| Protein GI | 86751574 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA TCTGTCCGGC GGGCACGCCC GCGGCGCTGC ACGATGCCGT CGCGGTGGGG
GCCGATGCGA TCTATTGCGG CTTCAACGAC GAGACCAATG CGCGCAATTT CCCGGGGCTG
AATTTCAGCC GCGAGGAAAT GCGCGAGTCG ATCGCGCACG CGCATCGCTA CGGCGTCAAC
GTGCTGGTGG CGATTAACAC CTTCGCCCGC GCCGGCAATG TCGAGCTGTG GCAGCGCGCG
GTCGACGACG CGGTCGAGGC CGAAGCCGAT GCGGTGATCC TCGCCGATGT CGGCGTGATG
GATTATTGCG CCAGGACCCA TCCGCAGCAG CGCCTGCACG TCTCGGTGCA GGCCGCCGCG
GCGAACGCGG ATTCGATCCG GTTCTATGTC GACAGCTTCA ACGCCAAGCG CGTGGTGCTG
CCGCGCGTGC TCAGCGTGCA GGAGATCGCC GCGATCACGC GCGAGGTCAA GTGCGAGACC
GAAGTGTTCA TCTTCGGCGG GCTGTGCGTG ATGGAGGAGG GTCGCTGCTC GCTGTCGTCC
TACGCCACCG GCAAATCGCC GAACATGGAC GGGGTCTGCT CGCCGGCGGG CGCGATCCAG
TATCGCGAGG AGAACGGCGC GCTGATCTCG CGGCTCGGCG ATTTCACCAT CAACAAATTC
GCCAAGGGCG AGGCGGCGGC CTATCCGACG CTGTGCAAGG GGCGCTACCA GACCGACGAG
GGCTGCGGCT ATCTGTTCGA GGACCCGGCT TCGCTCGACG CCACCACGAT GCTGCCGGAG
CTGCGCGCCG CCGGCGTCGC GGCGCTGAAG ATCGAGGGCC GCCAGCGCGG CCGCGCCTAT
ATCGAGCGCG TGGTGAAGAC CTTCAAGGAG GTGCTGAGCG CGCTGGACGA CGGAAGGCCG
TTGCCGGTCG ACGCGCTGCG CGGGCTCAGC GAGGGCCAGT CCAACACCAC CGGCGCCTAC
AAGAAGACCT GGCGCTGA
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| Protein sequence | MELICPAGTP AALHDAVAVG ADAIYCGFND ETNARNFPGL NFSREEMRES IAHAHRYGVN
VLVAINTFAR AGNVELWQRA VDDAVEAEAD AVILADVGVM DYCARTHPQQ RLHVSVQAAA
ANADSIRFYV DSFNAKRVVL PRVLSVQEIA AITREVKCET EVFIFGGLCV MEEGRCSLSS
YATGKSPNMD GVCSPAGAIQ YREENGALIS RLGDFTINKF AKGEAAAYPT LCKGRYQTDE
GCGYLFEDPA SLDATTMLPE LRAAGVAALK IEGRQRGRAY IERVVKTFKE VLSALDDGRP
LPVDALRGLS EGQSNTTGAY KKTWR
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