Gene RPB_4468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4468 
Symbolpgk 
ID3912284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5059264 
End bp5060460 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content68% 
IMG OID637886371 
Productphosphoglycerate kinase 
Protein accessionYP_488062 
Protein GI86751566 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT CATTCCGCAC CCTCGACGAC GTCGACGTCA AAGGCCAACG CGTGCTGCTG 
CGCGTCGATC TCAACGTGCC GATGGATTCC GGCAAGGTCA CCGACACCAC GCGGCTCGAC
CGTGTCGCGC CGACGATCAC CGAGATCGCC GGCAAGGGCG GCAAGGTGAT CCTGCTGGCG
CATTTCGGCC GGCCGAAGGG GCGGGACGAC AAGAACTCGC TGAAGCCGGT CGCGGCCGCG
CTCGCGGACG TCATCAAGAA GCCGGTCGGC TTCGCCGAGG ACTGTGTCGG CGAGCCCGCC
GCGACAGCGA TCGCGGCGAT GCAGGACGGC GACATCCTCT GCCTCGAGAA CACCCGGTTC
CATCCTGAAG AGGAAAAGAA CGATCCGACG TTCGTCGCCA AGCTCGCCGA GCTCGGCGAC
ATCTGGGTCA ATGACGCGTT CTCGGCGGCG CACCGCGCCC ACGCCTCCAC CGAGGGCCTC
GGCCACAAGC TGCCGGCCTA TGCGGGCCGC ACCATGCAGG CCGAGCTGGT GGCGCTGAAC
AAGGCGCTGG AAGCGCCGAC CAAGCCGGTG ATCGCCATTG TCGGCGGCGC CAAGGTGTCG
AGCAAGATCG ACCTCCTGGA AAACCTCGTC ACCAAGGTGC AGGCGCTGGT GATCGGCGGC
GGCATGGCCA ACACCTTCCT GCACGCCCAG GGCTTCAAGG TCGGCAAATC GCTCTGCGAA
AAGGATCTGG CCGAGACCGC GCTGCGGATC ATGAACAAGG CCGAGGCCGC CAGCTGCGCG
ATCATCCTGC CGGTCGACGC CACCGTGGCG TATCATTTCG AGGCCAACGC GCCGTCCTTC
GCCTACGGCC TCGACGCGAT TCCGGACGAC GCCATGATCC TCGACGTCGG CCCGCGCTCG
ATCGAGCGCA TCCATGCGGC GATCGACGAC GCCGCAACAT TGGTCTGGAA CGGCCCGGTC
GGCGCCTTCG AGCTGACGCC GTTCGACAAG GGCACGGTCG AGGCGGCCAG GCACGCCGCC
CGCCGCACCA AGGCCGGGAT GCTGATCTCG GTCGCCGGCG GCGGCGACAC CGTGGCGGCG
CTGAACCACG CCGGCGTGGC CGACGATTTC ACCTACATCT CGACCGCCGG CGGCGCCTTC
CTCGAATGGA TGGAAGGCAA GCCGCTGCCC GGCGTCGAGG TGCTGCGGGT GAAGTGA
 
Protein sequence
MTKSFRTLDD VDVKGQRVLL RVDLNVPMDS GKVTDTTRLD RVAPTITEIA GKGGKVILLA 
HFGRPKGRDD KNSLKPVAAA LADVIKKPVG FAEDCVGEPA ATAIAAMQDG DILCLENTRF
HPEEEKNDPT FVAKLAELGD IWVNDAFSAA HRAHASTEGL GHKLPAYAGR TMQAELVALN
KALEAPTKPV IAIVGGAKVS SKIDLLENLV TKVQALVIGG GMANTFLHAQ GFKVGKSLCE
KDLAETALRI MNKAEAASCA IILPVDATVA YHFEANAPSF AYGLDAIPDD AMILDVGPRS
IERIHAAIDD AATLVWNGPV GAFELTPFDK GTVEAARHAA RRTKAGMLIS VAGGGDTVAA
LNHAGVADDF TYISTAGGAF LEWMEGKPLP GVEVLRVK