| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4466 |
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| Symbol | |
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| ID | 3912282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5056019 |
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| End bp | 5058007 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886369 |
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| Product | transketolase |
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| Protein accession | YP_488060 |
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| Protein GI | 86751564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.913477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGG TCGATCATTC CCGTATGGCG AACGCAATCC GGGCGCTGGC GATGGACGCG
GTCGAGAAGG CCAAATCCGG CCACCCCGGC CTGCCGATGG GCGCCGCCGA CGTCGCCACA
GTGCTGTTCA CCGAGTTCCT GAAATTCGAC GCCGCCGATG CGCACTGGCC GGATCGCGAC
CGCTTCATCC TGTCCGCCGG CCACGGCTCG ATGCTGCTCT ATGCGCTGTT GTACCTCACC
GGTAATTCCG AGCTGACGCT CGACCAGATC AAGGCGTTCC GCCAGCTCGA CTCCAAGACG
CCCGGGCACC CGGAGAACTG CATCACAGAT TCGGTTGAAA CCACCACCGG CCCGCTCGGC
CAGGGCGTGG CGTCGTCGGT CGGCACCGCG CTGGCGGAGC GTCTGCTCGC CGCCGAATTC
GGCGAGATCG TCGATCACAC CACCTACGTG CTGTGCTCGG ACGGCGATCT GATGGAAGGC
GTGAGCCACG AGGCGATCGC GCTGGCCGGC CATCTCAGGC TGTCGAAGCT GATCTTCCTC
TACGACGACA ACGGCATCTC GATCGACGGC CCGCTGACGC TGACCGACAA TGTCGATCAG
GTCGCGCGCT TCCAGGCGCA TGGCTGGAAT GCGATGCGGA TCGACGGCCA CGATCACAAG
GCGATCGCCG AGGCGATCAA GGCCGCGAAA GCCTCCGACC GGCCGACCAT GATCGCCTGC
AAGACCACGA TCGGCTTCGG CGCCCCCACC CGGGCCGGGA CCTCCAAGGC GCATGGCGAG
CCGCTCGGCG CCGAAGAACT GGCCGGCGCC AAGAAGGCGC TGGGCTGGGA CTACGGCCCG
TTCGAAATTC CGGACGACGT GCTCTCCGCT TGGCGCGCGG TCGGCGCCAA GGGCGCCAAG
GCCCACGCGG AATGGCAGTC GAAGTTCGAC GCGATGGACA AGGAGCTGCG CGCCGAATTC
CAGCGCCGGG TGATCGACCG CAAGCGGCCG GCGGCGCTCG ACGGCGCGAT CCGCAAGCTC
AAGGACAGGC TCGTCGCGGA GCCGCAGACC ATCGCCACCC GCAAGGCCAG CGAGCTGGCG
CTGGAGGCCA TCGTCGAGGT GGTGCCGGAA ATGCTGCTCG GCTCGGCGGA CCTGACGCCG
TCCAACAACA CCCGCACCAA ACACGCGAAA GACGTCACCC CGGACGACTT CTCGGGTCGC
TACATCCATT ACGGCATCCG CGAAATGGGC ATGGCGGCGG CGATGAACGG TATCGCGATG
CATGGCGGTT TCGCGCCGGC CGGCGGCACC TTCATGTGCT TCGCCGACTA CGCCCGCCCG
TCGATGCGGA TCGCGGCGCT GTCGCATGTC CCGGTGGTCT ACATCATGAC CCATGATTCG
ATCGGGCTCG GCGAAGACGG CCCGACGCAT CAGCCGGTCG AGCACCTCGC TTCGCTGCGG
GCGATGCCCA ATATGCGGGT GTTCCGCCCG GCCGACCCGG TCGAGACCGC CGAATGCTGG
CAGCTCGCGC TGGAGAACAC CAAGGGCCCG ACGGTGCTGG CGCTGTCGCG GCAGAATCTG
ACGCCGGTGC GCACCAGCAA ATCCGACGAC AACCGCTGCG CCCGGGGCGC CTATGAGCTG
ATCGCCGCCG ACGGCAAGGC TCAGGTGACG ATCTTCGCCA CCGGCTCCGA GGTCGAGATC
GCGGTCGCGG CGCACAAGCT GCTCGCCGCC AAGGGCATCG CTGCGCGCGT GGTGTCGGTG
CCGTCGCTGG ATCTCTTGCT GCAGCAGGAC GACGCCACCC GCAAGGCGAT CATCGGCGAC
GCCCCGGTCA AGGTCGCGGT CGAGGCCGCG GTGCGGTTCG GCTGGGACGC GGTGATCGGC
CCGGAGGGCG GCTTCATCGG CATGTCGAGC TTCGGCGCCA GCGCGCCCGC GAAGGATCTG
TACAAGCATT TCGGAATTAC CGCCGAGGCG GTCGCAGAGG CTGCGGCAAG CCGTCTCGGC
GGCAAGTAA
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| Protein sequence | MAKVDHSRMA NAIRALAMDA VEKAKSGHPG LPMGAADVAT VLFTEFLKFD AADAHWPDRD
RFILSAGHGS MLLYALLYLT GNSELTLDQI KAFRQLDSKT PGHPENCITD SVETTTGPLG
QGVASSVGTA LAERLLAAEF GEIVDHTTYV LCSDGDLMEG VSHEAIALAG HLRLSKLIFL
YDDNGISIDG PLTLTDNVDQ VARFQAHGWN AMRIDGHDHK AIAEAIKAAK ASDRPTMIAC
KTTIGFGAPT RAGTSKAHGE PLGAEELAGA KKALGWDYGP FEIPDDVLSA WRAVGAKGAK
AHAEWQSKFD AMDKELRAEF QRRVIDRKRP AALDGAIRKL KDRLVAEPQT IATRKASELA
LEAIVEVVPE MLLGSADLTP SNNTRTKHAK DVTPDDFSGR YIHYGIREMG MAAAMNGIAM
HGGFAPAGGT FMCFADYARP SMRIAALSHV PVVYIMTHDS IGLGEDGPTH QPVEHLASLR
AMPNMRVFRP ADPVETAECW QLALENTKGP TVLALSRQNL TPVRTSKSDD NRCARGAYEL
IAADGKAQVT IFATGSEVEI AVAAHKLLAA KGIAARVVSV PSLDLLLQQD DATRKAIIGD
APVKVAVEAA VRFGWDAVIG PEGGFIGMSS FGASAPAKDL YKHFGITAEA VAEAAASRLG
GK
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