| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4462 |
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| Symbol | |
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| ID | 3912278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5051822 |
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| End bp | 5053234 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637886365 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_488056 |
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| Protein GI | 86751560 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCT CGGATTTGCA CCTCGCCGCC GGCGCCCGCG CGCCGGCGCA ATCGTCTGCG
TGGCGGACTG AAATCGTCGA GACGCTGTGG CTCGCGGTGC CGATGGCACT GACGCAGCTC
GGCCAGATCG CGATGATGAC GACCGACCTC GCGCTGATCG GCCGGCTCGG CGATTCCGCC
GTGGCCGCGG CGGCGCTCGC CCATACGGTG CTGTTCATCG CCTTCATGCT CGGCATCGGC
CTCGTCTCCG CCGTGGCGCC GCTGGCGGCG CAGGCCTATG GCGCACGCGA GCCGCGCCAG
GTCCGCGCAT CGCTGCGCGT CGGGATGTGG GCGGCGGTGA TCGCCGGCAT CCCGCTGACG
CTGAGCCAGT TCTACGGCGA GCGGATGCTG CTGGCCGCTG GCCAGGAGCC GCAGGTGGCT
GAGCTCGCCG GGCGCTATCT GCATGGGCTC GCCTGGTCGC TGGTGCCGGG CTGGATCTTC
ATCGCGCTGC GCAGCTTCAT GGGCGCGGTC AACCGCCCCG AGCCGGCGCT GTGGATCATG
TTCGCCGCGG TGCCGCTGAA CGGCGTGCTC GCCTACGCGC TGATCCACGG CGCGTTCGGG
CTGCCGCAGC TCGGCATTTT CGGCGCCGGC CTCGCCACCA GCATCATCTC GATCGCGATG
GGCATCGCCG CGGCGGTGGC CTGCGTGACG CTGCAGCCTT TCCGCAAATA TCAGGTGTTC
GGCGAACTGA TGAAGTTCGA TGCGCCGCTG ATGCGACGGC TGCTGGCGCT CGGCCTGCCG
ATCTCCGGCG CCTCCGTGCT GGAATACGGC GTGTTCGGCG CCGCCGCACT GTTGATGGGC
CAGATCGGCA CCGCGGCGCT CGCCGCGCAT CAGATTGCGC TGCAGATCGC CGCCATCATG
TTCATGGTGC CGCTCGGCAT CTCGCTCGCC GCCACCGTGC GCGTCGGCCA TGCGATCGGC
CGTCACGATC CGGCCGGCGC ACGCCGCGCC GGCTTCACCG CGATCGGGCT CGGATTCGTC
TTCATGGCCT TGATGACGCT GCTGGTGGCG CTGACGCGGC ACGAGATTCC GCAACTGTTT
CTCGGCAATT CCACGACGGC CGTGGAGACC GCGCAGCTCA CCGCGTCGCT GCTGCTGGTC
GGCGCCAGCT TCTTCATCGC CGACGGCCTG CAGGTGGTCG CCAACGGCGC GCTGCGCGGC
AAGAGCGATA CCCGGATCCC GCTGCTGTTC GCGGTGCTGG GGTTCTGGGT GGTCGGCTTT
CCGTTCAGCT ATCTGCTCGG CTTCCCCGGC GGCTTCGGCC CGTTCGGCGT TTGGATCGGG
CTGGCGATCG GGCTCGCGGT CTATGCCGCG CTGCTGGTGG CGCGATTCCA TCTGCTGACG
CGCGCGCCGC CGCCGGTTCC GGCGCAAAGC TGA
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| Protein sequence | MTSSDLHLAA GARAPAQSSA WRTEIVETLW LAVPMALTQL GQIAMMTTDL ALIGRLGDSA
VAAAALAHTV LFIAFMLGIG LVSAVAPLAA QAYGAREPRQ VRASLRVGMW AAVIAGIPLT
LSQFYGERML LAAGQEPQVA ELAGRYLHGL AWSLVPGWIF IALRSFMGAV NRPEPALWIM
FAAVPLNGVL AYALIHGAFG LPQLGIFGAG LATSIISIAM GIAAAVACVT LQPFRKYQVF
GELMKFDAPL MRRLLALGLP ISGASVLEYG VFGAAALLMG QIGTAALAAH QIALQIAAIM
FMVPLGISLA ATVRVGHAIG RHDPAGARRA GFTAIGLGFV FMALMTLLVA LTRHEIPQLF
LGNSTTAVET AQLTASLLLV GASFFIADGL QVVANGALRG KSDTRIPLLF AVLGFWVVGF
PFSYLLGFPG GFGPFGVWIG LAIGLAVYAA LLVARFHLLT RAPPPVPAQS
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