Gene RPB_4455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4455 
Symbol 
ID3912271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5043450 
End bp5044211 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID637886358 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_488049 
Protein GI86751553 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.234346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACT ATCTGATCGT CAGCGATGAA GACGCCGTGC GCGTGATCAC CATGCGCCGG 
CCGGAGAAGA AGAACGCGCT GACGCAGGAC ATGTATCGGG CGATGACCGC GGCGATCGAC
AGCGCGCAGA ACGATCCGAC CATCCGCTGC CTGATCATCA CCGGCGGCTC CGGCGTGTTC
ACCGCCGGCA ACGACCTCGA GGATTTCCTC AAGGCCGGCA CCGATGCGAG CGGCGCGCCG
CGCGTCACCG CGGCGACGGA TTTTCTCTAC GCGCTCGCGC GCAATACCAA GCCGCTGATC
GCCGCGGTCG ACGGGCTGGC GATCGGCATC GGCACCACGC TGCTGTTCCA CTGCGACTAT
GTGCTGGCCT CGACCTCGGC GGTGTTCTCG ACGCCGTTCA TCCAGCTCGG CCTGGTGCCG
GAGGGCGCCT CCAGCCTGCT GGCGCCGCGC GCCATGGGCC ATCACCGCGC CTTCGCCATG
CTGGTGATGG GCCGCAAACT CTCCGCCGAC GACGCCCGCG ACGCCGGCTT CGTCAACGCC
GTGGTGGCGC CCGGCCACAC CGAAGAGGAA GCCATGAAAG CCGCCCGCGA CATCTGCGCG
CTGCCGGCCG AAGCGGTGGC GATCTCGCGC AAGCTGATCA AGCCGTCACC GACGGATCTG
ATCGCGCGGA TCGATCAGGA GAGCAAACTG TTCGGCGAGC GGATGAAGTC GCAGGAAGCG
ATCGGGGCGT TCACGCGGTT CTTTCAGAGG AAGAAGGGGT AG
 
Protein sequence
MSDYLIVSDE DAVRVITMRR PEKKNALTQD MYRAMTAAID SAQNDPTIRC LIITGGSGVF 
TAGNDLEDFL KAGTDASGAP RVTAATDFLY ALARNTKPLI AAVDGLAIGI GTTLLFHCDY
VLASTSAVFS TPFIQLGLVP EGASSLLAPR AMGHHRAFAM LVMGRKLSAD DARDAGFVNA
VVAPGHTEEE AMKAARDICA LPAEAVAISR KLIKPSPTDL IARIDQESKL FGERMKSQEA
IGAFTRFFQR KKG