Gene RPB_4453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4453 
Symbol 
ID3912268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5039903 
End bp5041033 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID637886355 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_488047 
Protein GI86751551 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGGC TCGCGACCAG GATTCTGCTG GTCGACGACG CGCAGATTGA ATGTCTCGCT 
TTCGAGCGCC AGTTACACAA GATTCCCTTC CACCGCCTGC AACTGGATTG GGTCTCGACC
TATGCCGATG CGCTCGTGGC GTTCGATCGC GACCAGCACG ATTTGTATTT CGTCGATTTC
CGGCTCGGTC CGGACAACGG CCTCGATCTC GTGCGTCGTG CACGAGTGAA CGGAATGACG
AAGCCGATCA TCGTGTTGAC CGGCCACGGC AGCGCGGCGG TCGACAAGGC GGCGACCGAC
GCTGGCGCCA ACGATTATCT GGTGAAGGGG GAGTTCGACG CGGTGCTGCT CGAGCGGTCG
ATTCGTTATG CCTCGCGCAA CGCCGACGCG CTTGCGGAGG TGGGACGCCG CCTGGTCGAA
AGCAGGGCGA CCGCCCGCGA ACTAATGGAG CAGACCAAGC GGCGCGCCGC CGCCGAGGCG
GATGTTCTCC AGGTGCTCAG ACAGACGATG ACGGACCAGG AGGCCGAGCG TCAGCGGATT
GCCCGGGAAA TGCACGACAA TCTCGGCCAG TCGGTAACGC TGGTTCAGCT CGGCCTCGAC
TCGATCGCAC GCAGCGCGTC GGCGCAGAGC GACATCGCGA GCAAGGCCGC GTCGTTGAAA
CGCATCACGC ACGATATGAG TAGGAGCCTG CATCGGATCG CCTGGGAGGT CCGCCCGACG
GCGCTCGATG CACTCGGCCT GGAGGACGCG ATCGGCCAGC TCGTCGCCGA GTGGGAGCCG
CATTGCAGCC TGTGCTTCGA TCTTCACTTC GGGCTCGGCG ACCGGAGGTT GCCGCCTGAT
GTCGAAAGCG CCCTGTATCG CGTAATTCAG GAAGGCATCA CCAACGTGGT GCGCCACGCA
AAGGCGACCC GGGTCGGGGT GATCCTGGAG ATGCGGGGCA ACGAACTGAT CTGCATCGTC
GAAGACGATG GCTGCGGTGT GCCCGAGGTC GAGTCGGGCG TCGCTGAAAA AACGTCGCGT
CGACTGGGCC TGCTGGGTAT GCGCGAGCGG CTGGCTCTCG TCAATGGAAC GGTCGAACTC
GAATCTCATC CAGAAAAGGG CACGGCGGTG TTCGCGCGCG TGCCGCTCTA G
 
Protein sequence
MSRLATRILL VDDAQIECLA FERQLHKIPF HRLQLDWVST YADALVAFDR DQHDLYFVDF 
RLGPDNGLDL VRRARVNGMT KPIIVLTGHG SAAVDKAATD AGANDYLVKG EFDAVLLERS
IRYASRNADA LAEVGRRLVE SRATARELME QTKRRAAAEA DVLQVLRQTM TDQEAERQRI
AREMHDNLGQ SVTLVQLGLD SIARSASAQS DIASKAASLK RITHDMSRSL HRIAWEVRPT
ALDALGLEDA IGQLVAEWEP HCSLCFDLHF GLGDRRLPPD VESALYRVIQ EGITNVVRHA
KATRVGVILE MRGNELICIV EDDGCGVPEV ESGVAEKTSR RLGLLGMRER LALVNGTVEL
ESHPEKGTAV FARVPL