Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4434 |
Symbol | |
ID | 3912249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5024548 |
End bp | 5025684 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637886339 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_488031 |
Protein GI | 86751535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATGA AGAGATTGAT GGTGGCGATC GGGCTTGCGC TCGCTGCGCC GGTGGCGGCC GATGCGCAGA ACATCGTGAT CGGCGCCAGC ATCCCCGATA CCGGGCCGGC CGCCGCGCCC GCGATATGGC AGCGGTGGGG TTACCAGCTG GCGCTCGACG AGGCCAATGC GGCGGGCGGC GTGCTCGGCA AGAAAGTCGA GATGCTCGCC TACGACAACC GCTGCAATCC GTCCGAAGCG GTGAACGTCG CCAACAAGCT GATCGAGGCC AAAGTCGTCG CCATCGTCGG CGCGCATTGT TCGTCGGCGA CGCTCGCCAC GATGCCGTTG ATCGCCGCGG CGAAGATTCC GCTGGTGGAC GGCATCGCGT CGAGCCCGAA GATCACCGAT CTGTCCGGCG TCGGCGGCAA CGAATGGACG TTCCGCATCA ACCCCTCCGA CGACGACATG ATGAACGCGC TCGGCATCTA TCTGAGCGGC AGCTCGAAGA TCAAGCGTGT GGCCATATTG GGCGAGGACA CCGACTTCGG ACGCGGCGGC GCCGCGGCCT TCGCGGCGGT CGCCAAGAAG CACGGACTCG AGGTGATCTC GACCGACTTC CACCCGCAGA GCTATCCGGA CTTCACCGCG CTGCTGACGC GTATCCAGCA GAGCAAGCCG GACGCGATCG CGATCTTCCA GCTCGCCGGC GATCAGCTCA ACTTCCTGCG CAATGCGATG CAGCTCGGCG TGCGGATTCC GTTCATCGGC CGTTTCGACC CCGGCGGCAA CAATCTGCAG ATCATCCAGG CCGGCGGCAT GGAGGGTTCG ATCACCGCGT GGACCTACAG CTATCTGGTC GATACGGCCG CCAACAAGGC CTTCGCCGCG GAGATCGAGA AGCGCCACAA GACAACGCCG GTGCTGCAGA CCTGGGCCGG CTACGACGCC ATGCGCCTGC TGCTGGCGGC GATCAAGAAC GCCGGCGCGA CCGACCCGAC GGCGATCCGC GACGCGATCA AGAAGATCGA GTTCACCAAC GTCATGGGGG CCAAAGTCAC CTTCGACGAC CACAACCAGG GTGGCAAGGT CGTGCTGATC GAAGGCGTGG CCGACAAGAA GGTCAAGATC CTGAAGGAAG TCTCGCTGGC GAACTGA
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Protein sequence | MLMKRLMVAI GLALAAPVAA DAQNIVIGAS IPDTGPAAAP AIWQRWGYQL ALDEANAAGG VLGKKVEMLA YDNRCNPSEA VNVANKLIEA KVVAIVGAHC SSATLATMPL IAAAKIPLVD GIASSPKITD LSGVGGNEWT FRINPSDDDM MNALGIYLSG SSKIKRVAIL GEDTDFGRGG AAAFAAVAKK HGLEVISTDF HPQSYPDFTA LLTRIQQSKP DAIAIFQLAG DQLNFLRNAM QLGVRIPFIG RFDPGGNNLQ IIQAGGMEGS ITAWTYSYLV DTAANKAFAA EIEKRHKTTP VLQTWAGYDA MRLLLAAIKN AGATDPTAIR DAIKKIEFTN VMGAKVTFDD HNQGGKVVLI EGVADKKVKI LKEVSLAN
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