Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4426 |
Symbol | |
ID | 3912241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5014996 |
End bp | 5015793 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637886331 |
Product | ABC transporter related |
Protein accession | YP_488023 |
Protein GI | 86751527 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.978838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA TCCTGAACGT CGCGGATGTC AGCAAGGCCT TCAGCGGCGT GCATGCGGTG CAGGGCACGT CGTTCGAGGT GGAAGCGGGC AGTATCACCG GCCTGATCGG CCCCAACGGC TCGGGCAAGA GCACGACCAT CGACTGCATC AGCGGCTTTC AGACCCTCGA TGCCGGCCGC GTCCTGCTCG GCGAGCGCGA CATCACCGGG CTGCGGCCAG CGGAGATCGC CAAGGCCGGC ATGATCCGCA CCTTCCAGAA CGTGCGCGTC TACGATTCCT ACAGCCTGCT CGACAATCTG CTCGTCGCCG GAGAAGCCTT CCGCGATCTG AACTGGTTCG ATGCGCTGGC GCGGACGCCG CGCTATCGCC GGGTCCGCGA CGCCGCCGAG GACCGCGCAC GCGGGCTGAT CGACCTGGTC GGTCTGACCC GGCTCAGCGA TGCGCCGGCC ACGGTGCTGT CCTACGGCCA GAAGAAGCTG CTCGCCTTCG CGGCGGCGAT GATGGCGAAG CCGCGCCTGA TCGTACTCGA CGAGCCGGTC GCCGGCGTCA ACCCGACGCG GGTCAACGAA GTCGCCGACA TCCTGCGCAA GGCCAACGCC ACCGGCATCT CCTTCCTGAT CGTCGAGCAC AATGTCGAGT TCATCAACAG CCTCTGTCAC AAGGTGATCG TGCTCGAACA GGGCCGCAAG CTGACGGAAG GCACGCCGGC GCAGATCCGC AACGATCCAC GCGTGCTGGA GGCCTATCTC GGCATCGCCC GGCCGGCCGC CGCGGCGGCG GAGGCCGAGG CATCATGA
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Protein sequence | MSAILNVADV SKAFSGVHAV QGTSFEVEAG SITGLIGPNG SGKSTTIDCI SGFQTLDAGR VLLGERDITG LRPAEIAKAG MIRTFQNVRV YDSYSLLDNL LVAGEAFRDL NWFDALARTP RYRRVRDAAE DRARGLIDLV GLTRLSDAPA TVLSYGQKKL LAFAAAMMAK PRLIVLDEPV AGVNPTRVNE VADILRKANA TGISFLIVEH NVEFINSLCH KVIVLEQGRK LTEGTPAQIR NDPRVLEAYL GIARPAAAAA EAEAS
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