Gene RPB_4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4426 
Symbol 
ID3912241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5014996 
End bp5015793 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content67% 
IMG OID637886331 
ProductABC transporter related 
Protein accessionYP_488023 
Protein GI86751527 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.978838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TCCTGAACGT CGCGGATGTC AGCAAGGCCT TCAGCGGCGT GCATGCGGTG 
CAGGGCACGT CGTTCGAGGT GGAAGCGGGC AGTATCACCG GCCTGATCGG CCCCAACGGC
TCGGGCAAGA GCACGACCAT CGACTGCATC AGCGGCTTTC AGACCCTCGA TGCCGGCCGC
GTCCTGCTCG GCGAGCGCGA CATCACCGGG CTGCGGCCAG CGGAGATCGC CAAGGCCGGC
ATGATCCGCA CCTTCCAGAA CGTGCGCGTC TACGATTCCT ACAGCCTGCT CGACAATCTG
CTCGTCGCCG GAGAAGCCTT CCGCGATCTG AACTGGTTCG ATGCGCTGGC GCGGACGCCG
CGCTATCGCC GGGTCCGCGA CGCCGCCGAG GACCGCGCAC GCGGGCTGAT CGACCTGGTC
GGTCTGACCC GGCTCAGCGA TGCGCCGGCC ACGGTGCTGT CCTACGGCCA GAAGAAGCTG
CTCGCCTTCG CGGCGGCGAT GATGGCGAAG CCGCGCCTGA TCGTACTCGA CGAGCCGGTC
GCCGGCGTCA ACCCGACGCG GGTCAACGAA GTCGCCGACA TCCTGCGCAA GGCCAACGCC
ACCGGCATCT CCTTCCTGAT CGTCGAGCAC AATGTCGAGT TCATCAACAG CCTCTGTCAC
AAGGTGATCG TGCTCGAACA GGGCCGCAAG CTGACGGAAG GCACGCCGGC GCAGATCCGC
AACGATCCAC GCGTGCTGGA GGCCTATCTC GGCATCGCCC GGCCGGCCGC CGCGGCGGCG
GAGGCCGAGG CATCATGA
 
Protein sequence
MSAILNVADV SKAFSGVHAV QGTSFEVEAG SITGLIGPNG SGKSTTIDCI SGFQTLDAGR 
VLLGERDITG LRPAEIAKAG MIRTFQNVRV YDSYSLLDNL LVAGEAFRDL NWFDALARTP
RYRRVRDAAE DRARGLIDLV GLTRLSDAPA TVLSYGQKKL LAFAAAMMAK PRLIVLDEPV
AGVNPTRVNE VADILRKANA TGISFLIVEH NVEFINSLCH KVIVLEQGRK LTEGTPAQIR
NDPRVLEAYL GIARPAAAAA EAEAS